LOCUS BC021107 2068 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane 9 superfamily protein member 4, mRNA
(cDNA clone MGC:31858 IMAGE:4896167), complete cds.
ACCESSION BC021107
VERSION BC021107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2068)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2068)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281478.
FEATURES Location/Qualifiers
source 1..2068
/db_xref="H-InvDB:HIT000039091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31858 IMAGE:4896167"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2068
/gene="TM9SF4"
/gene_synonym="dJ836N17.2"
/gene_synonym="KIAA0255"
/db_xref="GeneID:9777"
/db_xref="HGNC:HGNC:30797"
CDS 63..1940
/gene="TM9SF4"
/gene_synonym="dJ836N17.2"
/gene_synonym="KIAA0255"
/codon_start=1
/product="transmembrane 9 superfamily protein member 4"
/protein_id="AAH21107.1"
/db_xref="GeneID:9777"
/db_xref="HGNC:HGNC:30797"
/translation="MCETSAFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYSL
PFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCSQSNKPVTLTVEQSR
LVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRLGFTDVNKI
YLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNS
SPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFL
SGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSG
IQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRW
KKGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLG
YYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAI
WENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVL
VYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKI
D"
BASE COUNT 461 a 569 c 516 g 522 t
ORIGIN
1 gtggatccaa gatggcgacg gcgatggatt ggttgccgtg gtctttactg cttttctccc
61 tgatgtgtga aacaagcgcc ttctatgtgc ctggggtcgc gcctatcaac ttccaccaga
121 acgatcccgt agaaatcaag gctgtgaagc tcaccagctc tcgaacccag ctaccttatg
181 aatactattc actgcccttc tgccagccca gcaagataac ctacaaggca gagaatctgg
241 gagaggtgct gagaggggac cggattgtca acaccccttt ccaggttctc atgaacagcg
301 agaagaagtg tgaagttctg tgcagccagt ccaacaagcc agtgaccctg acagtggagc
361 agagccgact cgtggccgag cggatcacag aagactacta cgtccacctc attgctgaca
421 acctgcctgt ggccacccgg ctggagctct actccaaccg agacagcgat gacaagaaga
481 aggaaaaaga tgtgcagttt gaacacggct accggctcgg cttcacagat gtcaacaaga
541 tctacctgca caaccacctc tcattcatcc tttactatca tcgggaggac atggaagagg
601 accaggagca cacgtaccgt gtcgtccgct tcgaggtgat tccccagagc atcaggctgg
661 aggacctcaa agcagatgag aagagttcgt gcactctgcc tgagggtacc aactcctcgc
721 cccaagaaat tgaccccacc aaggagaatc agctgtactt cacctactct gtccactggg
781 aggaaagtga tatcaaatgg gcctctcgct gggacactta cctgaccatg agtgacgtcc
841 agatccactg gttttctatc attaactccg ttgttgtggt cttcttcctg tcaggtatcc
901 tgagcatgat tatcattcgg accctccgga aggacattgc caactacaac aaggaggatg
961 acattgaaga caccatggag gagtctgggt ggaagttggt gcacggcgac gtcttcaggc
1021 ccccccagta ccccatgatc ctcagctccc tgctgggctc aggcattcag ctgttctgta
1081 tgatcctcat cgtcatcttt gtagccatgc ttgggatgct gtcgccctcc agccggggag
1141 ctctcatgac cacagcctgc ttcctcttca tgttcatggg ggtgtttggc ggattttctg
1201 ctggccgtct gtaccgcact ttaaaaggcc atcggtggaa gaaaggagcc ttctgtacgg
1261 caactctgta ccctggtgtg gtttttggca tctgcttcgt attgaattgc ttcatttggg
1321 gaaagcactc atcaggagcg gtgccctttc ccaccatggt ggctctgctg tgcatgtggt
1381 tcgggatctc cctgcccctc gtctacttgg gctactactt cggcttccga aagcagccat
1441 atgacaaccc tgtgcgcacc aaccagattc cccggcagat ccccgagcag cggtggtaca
1501 tgaaccgatt tgtgggcatc ctcatggctg ggatcttgcc cttcggcgcc atgttcatcg
1561 agctcttctt catcttcagt gctatctggg agaatcagtt ctattacctc tttggcttcc
1621 tgttccttgt tttcatcatc ctggtggtat cctgttcaca aatcagcatc gtcatggtgt
1681 acttccagct gtgtgcagag gattaccgct ggtggtggag aaatttccta gtctccgggg
1741 gctctgcatt ctacgtcctg gtttatgcca tcttttattt cgttaacaag ctggacatcg
1801 tggagttcat cccctctctc ctctactttg gctacacggc cctcatggtc ttgtccttct
1861 ggctgctaac gggtaccatc ggcttctatg cagcctacat gtttgttcgc aagatctatg
1921 ctgctgtgaa gatagactga ttggagtgga ccacggccaa gcttgctccg tcctcggaca
1981 ggaagccacc ctgcgtgggg gactgcaggc acgcaaaata aaataactcc tgctcgtttg
2041 gaatgtaaaa aaaaaaaaaa aaaaaaaa
//