LOCUS BC021093 1070 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens hippocampus abundant transcript-like 1, mRNA (cDNA
clone IMAGE:3626757), partial cds.
ACCESSION BC021093
VERSION BC021093.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1070)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14211858.
FEATURES Location/Qualifiers
source 1..1070
/db_xref="H-InvDB:HIT000039081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3626757"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1070
/gene="HIATL1"
/gene_synonym="FLJ14753"
/db_xref="GeneID:84641"
/db_xref="HGNC:HGNC:23376"
CDS <1..900
/gene="HIATL1"
/gene_synonym="FLJ14753"
/codon_start=1
/product="HIATL1 protein"
/protein_id="AAH21093.2"
/db_xref="GeneID:84641"
/db_xref="HGNC:HGNC:23376"
/translation="LDICFILVAVPESLPEKMRPVSWGAQISWKQADPFASLKKVGKD
STVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGILSIVAQTAFL
SILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSITFPAISALVS
RNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYMFHLELTELGPKLNSNNVPLQGA
VIPGPPFLFGACIVLMSFLVALFIPEYSKASGVQKHSNSSSGSLTNTPERGSDEDIEP
LLQDSSIWELSSFEEPGNQCTEL"
BASE COUNT 269 a 249 c 266 g 286 t
ORIGIN
1 ctggacatct gcttcatctt agtggctgtt ccagaatctc tgcctgagaa aatgagaccg
61 gtttcctggg gagctcagat ttcttggaaa caagcagacc cttttgcgtc gttgaagaaa
121 gttggaaaag attctactgt cttactaatc tgcatcaccg tgtttctttc ataccttcct
181 gaagctggac agtattcaag tttttttctc tatctcaggc aggtcatagg ttttggatct
241 gttaaaattg cagcattcat agctatggta ggaattctgt ctattgtggc tcagacggcc
301 tttcttagca tcttgatgag atcattagga aataagaata ctgtcctcct tggcttgggc
361 ttccagatgc tccagttagc ctggtacggt tttggatcac aggcctggat gatgtgggca
421 gcagggaccg tggctgccat gtccagcatc acgtttccgg caatcagtgc cctcgtctct
481 cggaatgcag agtcagatca gcaaggagtt gcccagggga tcataactgg aataagagga
541 ctatgcaatg gcctggggcc agcactgtat ggcttcatat tctacatgtt ccatttggaa
601 ctgactgagt tgggcccgaa attgaattct aacaacgttc ccctgcaggg agctgtcatc
661 ccaggcccgc cgtttttatt tggggcatgt atagtcctta tgtcttttct ggttgcctta
721 ttcattcctg aatacagtaa agccagtgga gttcaaaaac acagtaacag cagcagcggc
781 agcctgacca acaccccaga acggggcagt gatgaggaca ttgagccact actgcaagac
841 agcagcatct gggagctctc ttcatttgag gagcctggga atcagtgcac tgagctgtaa
901 actcggcaga aagtgggatt ctgcatacgc catctctgag agccatggag ggagccacac
961 ccctggtgac ttcatggtgc tggatgggag acgctagcgg catccttcag ggccaagttt
1021 gataaatacc accgccatca ttctgctcat caaaaaaaaa aaaaaaaaaa
//