LOCUS BC021088 1542 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:1754
IMAGE:3543481), complete cds.
ACCESSION BC021088
VERSION BC021088.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1542)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1542)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16554591.
FEATURES Location/Qualifiers
source 1..1542
/db_xref="H-InvDB:HIT000039076"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1754 IMAGE:3543481"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1542
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 62..1411
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH21088.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 363 a 414 c 381 g 384 t
ORIGIN
1 gagatccttg ttgccgtccc ttcgcctcct tcaccgccgc agaccccttc aagttctagt
61 catgcgtgag tgcatctcca tccacgttgg ccaggctggt gtccagattg gcaatgcctg
121 ctgggagctc tactgcctgg aacacggcat ccagcccgat ggccagatgc caagtgacaa
181 gaccattggg ggaggagatg attccttcaa caccttcttc agtgaaacgg gtgctggcaa
241 gcatgtgccc cgggcagtgt ttgtagactt ggaacccaca gtcattgatg aagttcgcac
301 tggcacttac cgccagctct tccaccctga gcaactcatc acaggcaagg aagatgctgc
361 caataactat gcccgagggc actacaccat tggcaaggag atcattgacc tcgtgttgga
421 ccgaattcgc aagctggctg accagtgcac cggtcttcag ggcttcttgg ttttccacag
481 ctttggtggg ggaactggtt ctgggttcac ctcgctgctc atggaacgtc tctcagttga
541 ttatggcaag aagtccaagc tggagttctc catttacccg gcgccccagg tttccacagc
601 tgtagttgag ccctacaact ccatcctcac cacccacacc accctggagc actctgattg
661 tgccttcatg gtagacaatg aggccatcta tgacatctgt cgtagaaacc tcgatatcga
721 gcgcccaacc tacactaacc ttaaccgcct tattagccag attgtgtcct ccatcactgc
781 ttccctgaga tttgatggag ccctgaatgt tgacctgaca gaattccaga ccaacctggt
841 gccctacccc cgcatccact tccctctggc cacatatgcc cctgtcatct ctgctgagaa
901 agcctaccac gaacagctta ctgtagcaga gatcaccaat gcttgctttg agccagccaa
961 ccagatggtg aaatgtgacc ctcgccatgg taaatacatg gcttgctgcc tgttataccg
1021 tggtgacgtg gttcccaaag atgtcaatgc tgccattgcc accatcaaaa ccaagcgtac
1081 catccagttt gtggattggt gccccactgg cttcaaggtt ggcattaatt accagcctcc
1141 cactgtggtg cctggcggag acctggccaa ggtacagaga gctgtgtgca tgctgagcaa
1201 taccacagct gttgccgagg cctgggctcg cctggaccac aagtttgacc tgatgtatgc
1261 caagcgtgcc tttgttcact ggtacgtggg tgaggggatg gaggaaggcg agttttcaga
1321 ggcccgtgag gacatggctg cccttgagaa ggattatgag gaggttggag cagatagtgc
1381 tgacggagag gatgagggtg aagagtatta acctgtgtgc tgtactttta cactcctttg
1441 tcttggaact gtcttatttt tgttctgtaa atgtctattg ccgtaaattg ttaataaaat
1501 tgatgtttcc attttaaaaa aaaaaaaaaa aaaaaaaaaa aa
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