LOCUS BC021025 1288 bp mRNA linear HTC 12-DEC-2005
DEFINITION Homo sapiens collagen triple helix repeat containing 1, mRNA (cDNA
clone IMAGE:3617432).
ACCESSION BC021025
VERSION BC021025.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1288)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147546
This clone has the following problem: no cloning site /
microdeletion.
FEATURES Location/Qualifiers
source 1..1288
/db_xref="H-InvDB:HIT000090340"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3617432"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 346 a 268 c 303 g 371 t
ORIGIN
1 gggagggaga gaggcgcgcg ggtgaaaggc gcattgatgc agcctgcggc ggcctcggag
61 cgcggcggag ccagacgctg accacgttcc tctcctcggt ctcctccgcc tccagctccg
121 cgctgcccgg cagccgggag ccatgcgacc ccagggcccc gccgcctccc cgcagcggct
181 ccgcggcctc ctgctgctcc tgctgctgca gctgcccgcg ccgtcgagcg cctctgagat
241 ccccaagggg aagcaaaagg cgcagctccg gcagagggag gtggtggacc tgtataatgg
301 aatgtgctta caagggccag caggagtgcc tggtcgagac gggagccctg gggccaatgg
361 cattccgggt acacctggga tcccaggtcg ggatggattc aaaggagaaa agggggaatg
421 tctgagggaa agctttgagg agtcctggac acccaactac aagcagtgtt catggagttc
481 attgaattat ggcatagatc ttgggaaaat tgcggagtgt acatttacaa agatgcgttc
541 aaatagtgct ctaagagttt tgttcagtgg ctcacttcgg ctaaaatgca gaaatgcatg
601 ctgtcagcgt tggtatttca cattcaatgg agctgaatgt tcaggacctc ttcccattga
661 agctataatt tatttggacc aaggaagccc tgaaatgaat tcaacaatta atattcatcg
721 cacttcttct gtggaaggac tttgtgaagg aattggtgct ggattagtgg atgttgctat
781 ctgggttggc acttgttcag attacccaaa atgagatgct tctactggat ggaattcagt
841 ttctcgcatc attattgaag aactaccaaa ataaatgctt taattttcat ttgctacctc
901 tttttttatt atgccttgga atggttcact taaatgacat tttaaataag tttatgtata
961 catctgaatg aaaagcaaag ctaaatatgt ttacagacca aagtgtgatt tcacactgtt
1021 tttaaatcta gcattattca ttttgcttca atcaaaagtg gtttcaatat tttttttagt
1081 tggttagaat actttcttca tagtcacatt ctctcaacct ataatttgga atattgttgt
1141 ggtcttttgt tttttctctt agtatagcat ttttaaaaaa atataaaagc taccaatctt
1201 tgtacaattt gtaaatgtta agaatttttt ttatatctgt taaataaaaa ttatttccaa
1261 caaccttaac aaaaaaaaaa aaaaaaaa
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