LOCUS BC021008 4308 bp mRNA linear HTC 09-DEC-2005
DEFINITION Homo sapiens cytoplasmic FMR1 interacting protein 2, mRNA (cDNA
clone IMAGE:2989185).
ACCESSION BC021008
VERSION BC021008.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4308)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4308)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307954
This clone has the following problem: no cloning site /
microdeletion.
FEATURES Location/Qualifiers
source 1..4308
/db_xref="H-InvDB:HIT000090332"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2989185"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 1133 a 1161 c 1092 g 922 t
ORIGIN
1 gtagagttaa ggaagggcct cttcctctgt gagaattcag cattttgcaa ccatccaaaa
61 atgttgaggg catgctttgc ttccagggca gacagagcag cacagtgagc atgggacaca
121 ggatccctga cttgctgtgt gcccttaaac cagccactac ctctctgacg ttcaaaattg
181 agcaatggaa ggcagcctgc ccaactgtta cctgcctgtc atcatgaaag cctgcggatg
241 agtgcagaat acagaaactg cagccatgac cacgcacgtc accctggaag atgccctgtc
301 caacgtggac ctgcttgaag agcttcccct ccccgaccag cagccatgca tcgagcctcc
361 accttcctcc atcatgtacc aggctaactt tgacacaaac tttgaggaca ggaatgcatt
421 tgtcacgggc attgcaaggt acattgagca ggctacagtc cactccagca tgaatgagat
481 gctggaggaa ggacatgagt atgcggtcat gctgtacacc tggcgcagct gttcccgggc
541 cattccccag gtgaaatgca acgagcagcc caaccgagta gagatctatg agaagacagt
601 agaggtgctg gagccggagg tcaccaagct catgaagttc atgtattttc agcgcaaggc
661 catcgagcgg ttctgcagcg aggtgaagcg gctgtgccat gccgagcgca ggaaggactt
721 tgtctctgag gcctacctcc tgacccttgg caagttcatc aacatgtttg ctgtcctgga
781 tgagctaaag aacatgaagt gcagcgtcaa gaatgaccac tctgcctaca agagggcagc
841 acagttcctg cggaagatgg cagatcccca gtctatccag gagtcgcaga acctttccat
901 gttcctggcc aaccacaaca ggatcaccca gtgtctccac cagcaacttg aagtgatccc
961 aggctatgag gagctgctgg ctgacattgt caacatctgt gtggattact acgagaacaa
1021 gatgtacctg actcccagtg agaaacatat gctcctcaag gtgatgggct ttggcctcta
1081 cctaatggat ggaaatgtca gtaacattta caaactggat gccaagaaga gaattaatct
1141 tagcaaaatt gataaattct ttaagcagct gcaggtggtg ccccttttcg gcgacatgca
1201 gatagagctg gccagataca ttaagaccag tgctcactat gaagagaaca agtccaagtg
1261 gacgtgcacc cagagcagca tcagccccca gtacaatatc tgcgagcaga tggttcagat
1321 ccgggatgac cacatccgct tcatctccga gctcgctcgc tacagcaaca gtgaggtggt
1381 gacgggctca gggctggaca gccagaagtc agacgaggag tatcgcgagc tcttcgacct
1441 agccctgcgg ggtctgcagc ttctatccaa gtggagcgcc cacgtcatgg aggtgtactc
1501 ttggaagctg gttcatccca cagacaagtt ctgcaacaag gactgtcctg gcaccgcgga
1561 ggaatatgag agagccacac gctacaatta caccagtgag gaaaaatttg ccttcgttga
1621 ggtgatcgcc atgatcaaag gcctgcaggt gctcatgggc aggatggaga gcgtcttcaa
1681 ccaggccatc aggaacacca tctacgcggc attgcaggac ttcgcccagg tgacgctgcg
1741 tgagcccctg cggcaggcgg tacggaagaa gaagaatgtc ctcatcagcg tcctacaggc
1801 aattcgaaag accatctgtg actgggaggg agggcgagag ccccctaatg acccatgctt
1861 gagaggggag aaggacccca aaggtggatt tgatatcaag gtgccccggc gtgctgtggg
1921 gccatccagc acacagctgt acatggtgcg gaccatgctt gaatcactca ttgcagacaa
1981 aagcggctcc aagaagaccc tgaggagcag cctggatgga cccattgtcc tcgccataga
2041 ggactttcac aaacagtcct tcttcttcac acatctgctc aacatcagtg aagccctgca
2101 gcagtgttgt gacctctccc agctctggtt ccgagaattc ttcctggagt taaccatggg
2161 ccgacgaatc cagttcccca tcgagatgtc catgccctgg attctaacgg accatatcct
2221 ggaaaccaaa gaaccttcca tgatggagta tgtcctctac cctctggatc tgtacaacga
2281 cagcgcctac tatgctctga ccaagtttaa aaagcagttc ctgtacgatg agatagaagc
2341 tgaggtgaac ctgtgttttg atcagtttgt ctacaagctg gcagaccaga tctttgctta
2401 ctacaaagcc atggctggca gtgtcctgtt ggataaacgt tttcgagctg agtgtaagaa
2461 ttatggcgtc atcattccgt atccaccgtc caatcgctat gaaacactgc tgaagcagag
2521 acacgtccag ctgttgggta gatcaattga cttgaacaga ctcattaccc agcgcacctc
2581 tgccgccatg tataaatcct tggaccaagc tatcagccgc tttgagagtg aggacctgac
2641 ctccattgtg gagctggagt ggctgctgga gattaaccgg ctcacgcatc ggctgctctg
2701 taagcatatg acgctggaca gcttcgatgc catgttccga gaggccaatc acaatgtgtc
2761 cgccccctat ggccgtatca ccctgcatgt cttctgggaa ctgaactttg actttctccc
2821 caactactgc tacaatgggt ccactaaccg ttttgtgcgg actgccattc ctttcaccca
2881 agaaccacaa cgagacaaac ctgccaacgt ccagccttat tacctctatg gatccaagcc
2941 tctcaacatt gcctacagcc acatctacag ctcctacagg aatttcgtgg ggccacctca
3001 tttcaagact atctgcagac tcctgggtta tcagggcatc gctgtggtca tggaggaact
3061 gctaaagatt gtgaagagct tgctccaagg aaccattctc cagtatgtga aaacactgat
3121 agaggtgatg cccaagatat gccgcttgcc ccgacatgag tatggctccc cagggatcct
3181 ggagttcttc caccaccagc tgaaggacat cattgagtac gcagagctca aaacagacgt
3241 gttccagagc ctgagggaag tgggcaatgc catcctcttc tgcctcctca tagagcaagc
3301 tctgtctcag gaggaggtct gcgatttgct ccatgccgca cccttccaaa acatcttgcc
3361 tagagtctac atcaaagagg gggagcgcct ggaggtccgg atgaaacgtc tggaagccaa
3421 gtatgccccg ctccacctgg tccctctgat cgagcggctg gggacccctc agcaaatcgc
3481 cattgctcgc gagggtgacc tcctgaccaa ggagcggctg tgctgtggcc tgtccatgtt
3541 cgaggtcatc ctgacccgca ttcggagcta cctgcaggac cccatctggc ggggcccacc
3601 gcccaccaat ggcgtcatgc acgtcgatga gtgtgtggag ttccaccggc tgtggagcgc
3661 catgcagttc gtgtactgca tccctgtggg aaccaacgag ttcacagctg agcagtgttt
3721 cggcgatggc ttgaactggg ctggttgctc catcattgtc ctgctgggcc agcagcgtcg
3781 ctttgacctg ttcgacttct gttaccacct gctaaaagtg cagaggcagg acgggaagga
3841 tgaaatcatt aagaatgtgc ccctgaagaa gatggccgac cggatcagga agtatcagat
3901 cttgaacaat gaggtttttg ccatcctgaa caaatacatg aagtccgtgg agacagacag
3961 ttccactgtg gagcatgtgc gctgcttcca gccacccatc caccagtcct tggccaccac
4021 ttgctaagca gaagatcctg cagaccctta tctggaggag gaagagaagc aggagagaga
4081 aagccacagc cagcctgcca taggatccaa ctggacaacg tgtgggatgg acctggaaac
4141 aagcacctcc ccaaacacat caccactccc tagggcgggg cctgtgcatg ctctcccatg
4201 acatctccat gctggtttct ccatagcata aatgaaaaaa aaaaaaaaaa agtaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//