LOCUS BC020981 3600 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 2, beta
110kDa, mRNA (cDNA clone MGC:9704 IMAGE:3849379), complete cds.
ACCESSION BC020981
VERSION BC020981.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3600)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3600)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504204.
FEATURES Location/Qualifiers
source 1..3600
/db_xref="H-InvDB:HIT000039065"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9704 IMAGE:3849379"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3600
/gene="GTF3C2"
/gene_synonym="KIAA0011"
/gene_synonym="TFIIIC-BETA"
/gene_synonym="TFIIIC110"
/db_xref="GeneID:2976"
/db_xref="HGNC:HGNC:4665"
/db_xref="MIM:604883"
CDS 30..2765
/gene="GTF3C2"
/gene_synonym="KIAA0011"
/gene_synonym="TFIIIC-BETA"
/gene_synonym="TFIIIC110"
/codon_start=1
/product="general transcription factor IIIC, polypeptide
2, beta 110kDa"
/protein_id="AAH20981.1"
/db_xref="GeneID:2976"
/db_xref="HGNC:HGNC:4665"
/db_xref="MIM:604883"
/translation="MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTS
AEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRK
RGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDL
DRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKV
SSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPR
STPRGSTSGKQKPHCRGMAPNGLPDHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLA
WKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFF
TGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQE
SCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKV
LLFSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTR
PHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKA
NSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYG
LCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALN
PINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLF
QDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGG
QSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP"
BASE COUNT 849 a 998 c 885 g 868 t
ORIGIN
1 cgagggggca gccattttgg ggggtgctga tggatacctg cggggtcggc tatgttgccc
61 tgggggaggc cggccccgtg gggaacatga ctgtggtaga ctctcctgga caagaggtgc
121 taaatcagct tgatgtcaag acctcttcag aaatgaccag tgcagaggct tccgtagaga
181 tgtcattacc tacccctttg cctggatttg aggattctcc tgatcagagg aggctccctc
241 cagagcagga aagcctctcc agactggaac agccagatct ttcttcagag atgtcaaagg
301 tctcaaagcc tagggcctca aagcctggcc ggaagagagg tggtaggaca cgaaaaggcc
361 ccaaaaggcc ccaacagcct aatcctccat cagccccact ggttcctggt ctcttagatc
421 aatccaaccc tctgtccacc cccatgccta agaaacgagg tcgaaagtcc aaggcagagc
481 tgctgctgct gaagttgtca aaagacctag atcggccaga atctcaatct ccaaagaggc
541 cccctgagga ctttgagacc ccttctgggg aacgaccccg ccgaagggct gcccaagtgg
601 cacttctgta tcttcaggaa ctggctgaag agctctcaac agccctgcct gcccctgtgt
661 cctgtcctga gggccccaag gtgagcagcc ccaccaaacc gaagaagatc cggcagccag
721 cagcctgtcc aggtggagaa gaggtggatg gtgctccacg ggatgaagac ttttttctcc
781 aggttgaggc tgaagatgtg gaagaaagtg agggcccaag tgagagctca tctgaacctg
841 agcctgtagt gccccgaagc accccacgag gatctacttc agggaaacag aaaccacact
901 gccgaggaat ggctcccaat ggcttaccag atcatatcat ggctcctgtt tggaagtgcc
961 tccatctcac caaggacttc cgagagcaga aacattcata ctgggagttt gctgagtgga
1021 ttcctttagc ctggaagtgg cacttgttat ctgagcttga ggccgctccc tacctgcccc
1081 aggaggagaa gtctccattg ttttctgtac aacgtgaagg gctacctgaa gatggcaccc
1141 tctaccgaat aaacagattt agctcgatca cagcacatcc agagcgctgg gatgtgtcct
1201 tcttcacggg gggaccgctc tgggctctgg actggtgccc agtgccagag ggggcaggag
1261 cctcgcaata tgtggctctt ttctccagcc ctgacatgaa tgagacacac ccactgagcc
1321 agcttcattc gggtcctggg ctgctccagc tctggggcct tgggaccttg cagcaagaaa
1381 gctgtcctgg caacagggcc cactttgtct atgggattgc ttgtgacaac ggctgcatct
1441 gggacctcaa gttctgcccc agtggagcat gggaacttcc aggcacccct cggaaggctc
1501 ctctcctgcc ccggttgggt ctcttggctc tggcctgctc agacgggaaa gtactgctat
1561 tcagtctacc ccatccggag gccctgctgg ctcagcaacc cccagatgca gtgaagcctg
1621 ccatatataa ggtacaatgt gtggcaactc tgcaggtggg gtctatgcaa gctacagacc
1681 cctctgagtg tggtcagtgc cttagcctgg cctggatgcc taccaggccc caccaacacc
1741 tagctgctgg atattataat ggcatggtgg ttttctggaa ccttcccact aactcacccc
1801 tgcagcggat acggctctct gatggctcct taaagctcta ccccttccag tgtttcctag
1861 cccatgacca ggctgtgcgt acccttcaat ggtgcaaagc taacagccat ttccttgtct
1921 ctgcggggag tgaccggaaa atcaaattct gggaccttcg acgtccttac gaacccataa
1981 actctatcaa gcgcttcttg agtacagaac tggcctggct gcttccctac aatggtgtca
2041 ctgtggctca ggacaactgc tatgcctctt atggactctg tgggattcat tatattgacg
2101 ctggttacct tggtttcaag gcctacttca ctgctcctcg aaaaggcacc gtttggagtc
2161 tttcaggatc cgactggctt gggacaatag ctgcaggaga tatatccggg gagctcattg
2221 ctgctatatt accagatatg gcactgaatc caataaatgt caagcgacct gtagagcgaa
2281 gatttcctat atataaagca gatctgatac cgtatcagga cagtcctgaa ggtccagacc
2341 attcttctgc ttcatctggg gtccccaacc ctcctaaggc tcgaacttac actgaaactg
2401 tcaaccatca ctacttgctc tttcaagaca cagatttggg ttcattccat gatctgctcc
2461 gtagagaacc aatgctgcgc atgcaggagg gagaggggca ttctcaactc tgcctggaca
2521 ggctgcagct ggaggctatt cataaggtac gtttcagccc aaacctggac tcctatggat
2581 ggctggtatc tggggggcag tcagggctgg ttcgaatcca ttttgtccgt ggactcgcct
2641 ccccactggg ccaccgtatg cagcttgaaa gccgagccca cttcaatgct atgttccaac
2701 catcctcccc cactagacgg cctggcttct ctccaaccag ccatcgcctt ctgcccactc
2761 cctagccttg gcccacacca gatccttgga gtgaagtcgg tcaagaacaa atggccccta
2821 tgcacagagc cataggaact gggggccttc cctggacagt gatcatgcca ggcctggacc
2881 tttaggcctg cctccccagg actccttaga tcccactctt tctacagact tctgtgatca
2941 cagccccctg cgggcagggg ggctctccct ccaccaactc tcaaggctcc tcagcctaag
3001 actatggctc atgagaaaca ctcaggcctg acctaggctt gggagtcaaa ctgctcatat
3061 tgagcatatt gttaagtggg taaagccaag taaaggtact gggtgttttt gtgaccactt
3121 gtgaatgggt gtatggagaa ctgaaaaggg tatctgcatg aaggctcctg tctgactatt
3181 ccaggatcca atattactgc cttctgaaac ttcctcttta gggtaaccat catgtatgcc
3241 cacgagggtg atagtaattc gtgagactga agttgcttag agtacttctt tgaccaagga
3301 ataccacaga caccctaccg atagaacagt ggctcagatc ttacttgctc ctgcttacga
3361 agtattccca atcactggtc atctgaccct acttgaacac tcctgaacag tcatgttttt
3421 taaaatcttc ctttatatca agtcagagag tatacttcta taaatttcac tcatggatgt
3481 taggaaatct agtcatcttc cctgtgattg ccctgttaag tatttaacca tagctatcat
3541 gtgtttccca aatcttctct agattaaata tcttcagtta cttcaaaaaa aaaaaaaaaa
//