LOCUS BC020968 1662 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens chemokine (C-X-C motif) receptor 4, mRNA (cDNA clone MGC:9199 IMAGE:3846345), complete cds. ACCESSION BC020968 VERSION BC020968.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1662) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1662) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC020968.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56790928. FEATURES Location/Qualifiers source 1..1662 /db_xref="H-InvDB:HIT000039055" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9199 IMAGE:3846345" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1662 /gene="CXCR4" /gene_synonym="CD184" /gene_synonym="D2S201E" /gene_synonym="FB22" /gene_synonym="HM89" /gene_synonym="HSY3RR" /gene_synonym="LAP3" /gene_synonym="LCR1" /gene_synonym="LESTR" /gene_synonym="NPY3R" /gene_synonym="NPYR" /gene_synonym="NPYRL" /gene_synonym="NPYY3R" /gene_synonym="WHIM" /db_xref="GeneID:7852" /db_xref="HGNC:HGNC:2561" /db_xref="MIM:162643" CDS 54..1112 /gene="CXCR4" /gene_synonym="CD184" /gene_synonym="D2S201E" /gene_synonym="FB22" /gene_synonym="HM89" /gene_synonym="HSY3RR" /gene_synonym="LAP3" /gene_synonym="LCR1" /gene_synonym="LESTR" /gene_synonym="NPY3R" /gene_synonym="NPYR" /gene_synonym="NPYRL" /gene_synonym="NPYY3R" /gene_synonym="WHIM" /codon_start=1 /product="chemokine (C-X-C motif) receptor 4" /protein_id="AAH20968.1" /db_xref="GeneID:7852" /db_xref="HGNC:HGNC:2561" /db_xref="MIM:162643" /translation="MEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTI YSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANW YFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGV WIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSC YCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEF ENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKR GGHSSVSTESESSSFHSS" BASE COUNT 428 a 393 c 351 g 490 t ORIGIN 1 ccgagggcct gagtgctcca gtagccaccg catctggaga accagcggtt accatggagg 61 ggatcagtat atacacttca gataactaca ccgaggaaat gggctcaggg gactatgact 121 ccatgaagga accctgtttc cgtgaagaaa atgctaattt caataaaatc ttcctgccca 181 ccatctactc catcatcttc ttaactggca ttgtgggcaa tggattggtc atcctggtca 241 tgggttacca gaagaaactg agaagcatga cggacaagta caggctgcac ctgtcagtgg 301 ccgacctcct ctttgtcatc acgcttccct tctgggcagt tgatgccgtg gcaaactggt 361 actttgggaa cttcctatgc aaggcagtcc atgtcatcta cacagtcaac ctctacagca 421 gtgtcctcat cctggccttc atcagtctgg accgctacct ggccatcgtc cacgccacca 481 acagtcagag gccaaggaag ctgttggctg aaaaggtggt ctatgttggc gtctggatcc 541 ctgccctcct gctgactatt cccgacttca tctttgccaa cgtcagtgag gcagatgaca 601 gatatatctg tgaccgcttc taccccaatg acttgtgggt ggttgtgttc cagtttcagc 661 acatcatggt tggccttatc ctgcctggta ttgtcatcct gtcctgctat tgcattatca 721 tctccaagct gtcacactcc aagggccacc agaagcgcaa ggccctcaag accacagtca 781 tcctcatcct ggctttcttc gcctgttggc tgccttacta cattgggatc agcatcgact 841 ccttcatcct cctggaaatc atcaagcaag ggtgtgagtt tgagaacact gtgcacaagt 901 ggatttccat caccgaggcc ctagctttct tccactgttg tctgaacccc atcctctatg 961 ctttccttgg agccaaattt aaaacctctg cccagcacgc actcacctct gtgagcagag 1021 ggtccagcct caagatcctc tccaaaggaa agcgaggtgg acattcatct gtttccactg 1081 agtctgagtc ttcaagtttt cactccagct aacacagatg taaaagactt ttttttatac 1141 gataaataac ttttttttaa gttacacatt tttcagatat aaaagactga ccaatattgt 1201 acagttttta ttgcttgttg gatttttgtc ttgtgtttct ttagtttttg tgaagtttaa 1261 ttgacttatt tatataaatt ttttttgttt catattgatg tgtgtctagg caggacctgt 1321 ggccaagttc ttagttgctg tatgtctcgt ggtaggactg tagaaaaggg aactgaacat 1381 tccagagcgt gtagtgaatc acgtaaagct agaaatgatc cccagctgtt tatgcataga 1441 taatctctcc attcccgtgg aacgtttttc ctgttcttaa gacgtgattt tgctgtagaa 1501 gatggcactt ataaccaaag cccaaagtgg tatagaaatg ctggtttttc agttttcagg 1561 agtgggttga tttcagcacc tacagtgtac agtcttgtat taagttgtta ataaaagtac 1621 atgttaaact taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //