LOCUS BC020965 2516 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens STT3, subunit of the oligosaccharyltransferase
complex, homolog A (S. cerevisiae), mRNA (cDNA clone MGC:9042
IMAGE:3891543), complete cds.
ACCESSION BC020965
VERSION BC020965.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2516)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC020965.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303951.
FEATURES Location/Qualifiers
source 1..2516
/db_xref="H-InvDB:HIT000039052"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9042 IMAGE:3891543"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2516
/gene="STT3A"
/gene_synonym="MGC9042"
/gene_synonym="STT3-A"
/gene_synonym="TMC"
/db_xref="GeneID:3703"
/db_xref="HGNC:HGNC:6172"
/db_xref="MIM:601134"
CDS 93..2210
/gene="STT3A"
/gene_synonym="MGC9042"
/gene_synonym="STT3-A"
/gene_synonym="TMC"
/codon_start=1
/product="STT3, subunit of the oligosaccharyltransferase
complex, homolog A (S. cerevisiae)"
/protein_id="AAH20965.1"
/db_xref="GeneID:3703"
/db_xref="HGNC:HGNC:6172"
/db_xref="MIM:601134"
/translation="MTKFGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLRFESV
IHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHV
LHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISR
SVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSICWAAKCALAYFYMVSSWGGYVFLINL
IPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGL
CQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLL
DPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMY
GVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTY
PIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREA
YYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKA
YEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGKHIKENDYYTPTGEF
RVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAY
TTEHWLVRIYKVKDLDNRGLSRT"
BASE COUNT 625 a 566 c 574 g 751 t
ORIGIN
1 gcgccgctga acggatggct gagggagccc cgcggatcgt ttaggaaagc cggccagctg
61 atcgtcgtgt gttgccaccc attcatgtca agatgactaa gtttggattt ttgcgattgt
121 cctatgagaa gcaggacaca cttttgaagc ttctcattct gtcaatggct gctgtattat
181 ccttctccac tcgtctgttt gctgtcctga gatttgaaag tgttatccat gagtttgatc
241 cgtactttaa ttatcggact accaggttcc tggctgagga ggggttttat aaattccata
301 actggtttga tgaccgagcc tggtaccctt tgggacgaat cattggagga acaatttacc
361 caggtttaat gatcacctct gctgcaatct accatgtact ccattttttc cacatcacca
421 tcgacattcg gaatgtctgt gtgttcctgg cccctctctt ctcctccttc accaccatcg
481 tcacgtacca ccttaccaaa gagctcaagg atgcaggggc tgggcttctt gctgctgcca
541 tgattgctgt agttcctgga tatatctccc gatctgtggc tggctcctat gataatgaag
601 ggattgccat cttttgcatg ctactcacct actacatgtg gatcaaggca gtaaagactg
661 gttccatctg ttgggcagct aagtgtgccc ttgcttattt ctacatggtc tcgtcatggg
721 gaggttatgt gttcctgatc aacttaattc ctctccacgt cctcgtgctg atgctcacag
781 gccgtttctc tcaccggatc tatgtggcct actgtactgt ttactgcctg ggcactatac
841 tttctatgca gatctccttt gtgggtttcc agcctgtcct ttcatcagag cacatggcag
901 cctttggggt ctttggtctc tgccagatcc atgcctttgt ggattacctg cgcagcaagt
961 tgaatccaca acaatttgaa gttcttttcc ggagcgtcat ctctctggta ggctttgtcc
1021 ttctcaccgt gggagctctc ctcatgctga caggaaaaat atctccctgg acggggcgtt
1081 tctactcgct gctggatccc tcttatgcta agaacaacat ccccatcatt gcttctgtgt
1141 ctgagcatca gcccacaacc tggtcctcat actattttga cctgcagctc ctcgtcttca
1201 tgtttccagt tggcctctat tactgcttta gcaacctgtc tgatgcccgg atttttatca
1261 tcatgtatgg tgtgaccagc atgtactttt cagctgtaat ggtgcgtcta atgctagtgt
1321 tggcacctgt tatgtgcatt ctctctggca ttggagtctc ccaggtgctg tccacataca
1381 tgaagaatct ggacataagt cgtccagaca agaagagcaa gaagcaacag gattccacct
1441 accctattaa gaatgaagtg gcaagtggga tgatactggt catggctttc tttctcatca
1501 cctacacctt tcattcaacc tgggtgacca gtgaggccta ctcttctccg tccattgtac
1561 tatctgcccg tggtggggat ggcagtagga tcatatttga tgacttccga gaagcatatt
1621 attggcttcg tcataatact ccagaggatg cgaaggtcat gtcctggtgg gattatggct
1681 atcagattac agctatggca aaccgaacaa ttttagtgga caataacaca tggaataata
1741 cccatatttc tcgagtaggg caggcaatgg cgtccacaga ggaaaaagcc tatgagatca
1801 tgagggagct cgatgtcagc tatgtgctgg tcatttttgg aggcctcact gggtattcct
1861 ctgatgatat caacaagttt ctttggatgg tccggattgg agggagcaca gatacaggca
1921 aacatatcaa ggagaatgac tattatactc caactgggga gttccgtgtg gaccgtgaag
1981 gttctccagt gctgctcaac tgcctcatgt acaagatgtg ttactatcgc tttggacagg
2041 tttacacaga agccaagcgt cctccaggct ttgaccgtgt ccgaaatgct gagattggga
2101 ataaagactt tgagcttgat gtcctggagg aagcatatac cacagaacat tggctggtca
2161 ggatatacaa ggtaaaggac ctggataatc gaggcttgtc aaggacataa atgtcacgtc
2221 cagctctgat atgcttcgca ctgagcacat cacatttagg acgttgaaga tttttttttt
2281 tttttttttt ttaatatgca gtttgtaaga acaaaactgg atggcatcag aattgtctgg
2341 aagttttgtc ttgggcagta tgggctgggc caaatgaaat gatttttata attctaaaca
2401 ggttaccaaa tgaaatgtca tggctttact ttggtcaatt aaagggggga atttttttaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//