LOCUS BC020961 3292 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 17 (anion/sugar transporter),
member 5, mRNA (cDNA clone MGC:8885 IMAGE:3847279), complete cds.
ACCESSION BC020961
VERSION BC020961.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3292)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3292)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC020961.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: i Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222139.
FEATURES Location/Qualifiers
source 1..3292
/db_xref="H-InvDB:HIT000039048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8885 IMAGE:3847279"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3292
/gene="SLC17A5"
/gene_synonym="AST"
/gene_synonym="ISSD"
/gene_synonym="NSD"
/gene_synonym="SD"
/gene_synonym="SIALIN"
/gene_synonym="SLD"
/db_xref="GeneID:26503"
/db_xref="HGNC:HGNC:10933"
/db_xref="MIM:604322"
CDS 88..1575
/gene="SLC17A5"
/gene_synonym="AST"
/gene_synonym="ISSD"
/gene_synonym="NSD"
/gene_synonym="SD"
/gene_synonym="SIALIN"
/gene_synonym="SLD"
/codon_start=1
/product="solute carrier family 17 (anion/sugar
transporter), member 5"
/protein_id="AAH20961.1"
/db_xref="GeneID:26503"
/db_xref="HGNC:HGNC:10933"
/db_xref="MIM:604322"
/translation="MRSPVRDLARNDGEESTDRTPLLPGAPRAEAAPVCCSARYNLAI
LAFFGFFIVYALRVNLSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQ
WDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLTLFTPIAADLG
VGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISLPLSG
IICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSS
QKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLP
YLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLA
VAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPD
NTVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALNDHHGHRH"
BASE COUNT 859 a 702 c 714 g 1017 t
ORIGIN
1 ccggccgctc ggcccggggg cttcgggctg tcgggccggc gctcccttct ctgccaggtg
61 gcgagtacac ctgctcacgt aggcgtcatg aggtctccgg ttcgagacct ggcccggaac
121 gatggcgagg agagcacgga ccgcacgcct cttctaccgg gcgccccacg ggccgaagcc
181 gctccagtgt gctgctctgc tcgttacaac ttagcaattt tggccttttt tggtttcttc
241 attgtgtatg cattacgtgt gaatctgagt gttgcgttag tggatatggt agattcaaat
301 acaactttag aagataatag aacttccaag gcatgtccag agcattctgc tcccataaaa
361 gttcatcata atcaaacggg taagaagtac caatgggatg cagaaactca aggatggatt
421 ctcggttcct ttttttatgg ctacatcatc acacagattc ctggaggata tgttgccagc
481 aaaatagggg ggaaaatgct gctaggattt gggatccttg gcactgctgt cctcaccctg
541 ttcactccca ttgctgcaga tttaggagtt ggaccactca ttgtactcag agcactagaa
601 ggactaggag agggtgttac atttccagcc atgcatgcca tgtggtcttc ttgggctccc
661 cctcttgaaa gaagcaaact tcttagcatt tcatatgcag gagcacagct tgggacagta
721 atttctcttc ctctttctgg aataatttgc tactatatga attggactta tgtcttctac
781 ttttttggta ctattggaat attttggttt cttttgtgga tctggttagt tagtgacaca
841 ccacaaaaac acaagagaat ttcccattat gaaaaggaat acattctttc atcattaaga
901 aatcagcttt cttcacagaa gtcagtgccg tgggtaccca ttttaaaatc cctgccactt
961 tgggctatcg tagttgcaca cttttcttac aactggactt tttatacttt attgacatta
1021 ttgcctactt atatgaagga gatcctaagg ttcaatgttc aagagaatgg gtttttatct
1081 tcattgcctt atttaggctc ttggttatgt atgatcctgt ctggtcaagc tgctgacaat
1141 ttaagggcaa aatggaattt ttcaacttta tgtgttcgca gaatttttag ccttatagga
1201 atgattggac ctgcagtatt cctggtagct gctggcttca ttggctgtga ttattctttg
1261 gccgttgctt tcctaactat atcaacaaca ctgggaggct tttgctcttc tggatttagc
1321 atcaaccatc tggatattgc tccttcgtat gctggtatcc tcctgggcat cacaaataca
1381 tttgccacta ttccaggaat ggttgggccc gtcattgcta aaagtctgac ccctgataac
1441 actgttggag aatggcaaac cgtgttctat attgctgctg ctattaatgt ttttggtgcc
1501 attttcttta cactattcgc caaaggtgaa gtacaaaact gggctctcaa tgatcaccat
1561 ggacacagac actgaaggaa ccaataaata atcctgcctc tattaatgta tttttattta
1621 tcatgtaacc tcaaagtgcc ttctgtattg tgtaagcatt ctatgtcttt ttttaattgt
1681 acttgtatta gatttttaag gcctataatc atgaaatatc actagttgcc agaataataa
1741 aatgaactgt gtttaattat gaataatatg taagctagga cttctacttt aggttcacat
1801 acctgcctgc tagtcgggca acatgaagta ggacagttct gttgattttt tagggccata
1861 ctaaagggaa tgagctgaaa cagacctcct gatacctttg cttaattaaa ctagatgata
1921 attctcaggt actgataaac acctgttgtt gttcactttc ctcataaaaa ttgtcagctc
1981 tctctgacac ttagacctca aactttagca tctctgtgga gctgccatcc actgtataat
2041 ttcgcctggc aactggactg aggggagtgt gcccaggcag ctgccaagca ctccctccct
2101 ggcttcaggg tcagagtgcc cagcgtttat cagaggcagc atccaagccc agagccagtg
2161 tcgactcttc ggctggtgcc tttcctctga ggggctatca atgtgtagat aaagccctga
2221 gtaggcaaga gcagtgagat ccactgctat ggtcttgata catcctcaaa ctttcccttc
2281 ccagcacaga ggaatattgg ctggcatgca acctgcaaaa gaaaaatgcg aagcggccgg
2341 gcacggtggc tcatgcctgt agtcccagca ctttgggggg ctgaggtggg cgaatcatga
2401 gatcaggagt tcgagaccag cctggccagc atggtgaaac cccatctcta ctaaaaatac
2461 aaaaaattag ctgggcgtgg tgacgggcgc ctgtaatccc agatactcag gaggctgagg
2521 taggagaatc acttgaacct gggagatgga agttgcagtg aaccaagatc acgccactgc
2581 actccagcct gggcgatgga gcgagactcc aactcaaaaa aaaaaaaaga ataaagaaag
2641 aaaagtgcga tgcccagtca atcacaaata agatcatcct ggtttaaatc tactctcaca
2701 tggatcacag tataaatttc tatgtgctgt gttttgttcg tttgtatttt gtagagatgg
2761 ggtctcgttt tgtcgcccag gctggttttg aactcctggc ttcaagcgat cctcctgtct
2821 cggcctcaca aagtgttgag actacaggca tgagccactg tgcccagcct gttctatgtt
2881 tttaagctac acgagaattt tttttttaat taattctcac tgtttgttca gtctgtcttc
2941 atctaagttt gtgttgcagt ttaaagttaa agtgactttt aaaggccaca tcacctgaga
3001 ctagggtaat catctttact tctggttcct gaaatcatat ttttccagtg gaccatcctc
3061 cagtggctgt ggttgttgag catgctttca gaacacctat gtggcttaaa acttagttta
3121 tgttttgtgt tcaacactac gtgtaatatt ttaaaactgt ttaatgtgat gtgaatacat
3181 ttatgtacat ttatttttaa atttgtaaat agctttaaat tgctatggca atgtttcttt
3241 tataaatcat caaaataaac ctttgtgaat tgaaaaaaaa aaaaaaaaaa aa
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