LOCUS BC020957 2463 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 71, mRNA (cDNA clone
MGC:8821 IMAGE:3851898), complete cds.
ACCESSION BC020957
VERSION BC020957.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2463)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2463)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: n Column: 10.
FEATURES Location/Qualifiers
source 1..2463
/db_xref="H-InvDB:HIT000039045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8821 IMAGE:3851898"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2463
/gene="C17orf71"
/gene_synonym="FLJ10587"
/db_xref="GeneID:55181"
/db_xref="HGNC:HGNC:25551"
/db_xref="IMGT/GENE-DB:25551"
/db_xref="MIM:25551"
CDS 258..2186
/gene="C17orf71"
/gene_synonym="FLJ10587"
/codon_start=1
/product="C17orf71 protein"
/protein_id="AAH20957.1"
/db_xref="GeneID:55181"
/db_xref="HGNC:HGNC:25551"
/db_xref="IMGT/GENE-DB:25551"
/db_xref="MIM:25551"
/translation="MLLDQLRSHCTVKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFH
IDSSSSSSSGQLVDFTLREFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISA
ASKLYEVAIDGKEEDLGSPTGELTSKILSSIKVLEGFLDIDTKFSENRCQKALPMAHS
AYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLHEDCYKFWSNGHQLCE
ERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFD
IKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPDPAPAKNESSPAPPDSDADKLKEKE
PQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDNPEVHGQVEVKTEKRPNFVDRQA
STVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWD
IVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRRDDIARAFVGFEYEDSRGR
RFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVP
DAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPPKEN
VQLMSYKVLRGVLKAVTQ"
BASE COUNT 728 a 535 c 541 g 659 t
ORIGIN
1 gactcctttt cctctttcaa ctcaatggag ccctcaaggt agaacctcct cggaaccaag
61 acccagctca tccagacaag cccaagaaac attctcccaa aaggaggctg cagcatgccc
121 tggaggacca gatctataga atcttccgga agagtcgtgt cttgactaat cagagcatca
181 actgcctctt tactgtgcct gccaaccaag ctttcgtgta catagtaccg ggaagccagg
241 aggaggaccc agtaggtatg ttgctggacc aacttaggag tcattgtact gtgaaggacc
301 cggaatcttt gctggtgcct gcaccccttt ctgggcctag gcgataccag gtgatgaggc
361 agcacagccg acaacaactt tcctttcaca ttgacagcag cagttccagt tcttcaggcc
421 agctagtgga tttcactctt cgggaattcc tatggcagca tgtggagcta gttctaagca
481 agaaaggttt cgatgacagt gtgggcagga acccacagcc ttcccatttt gaacttccta
541 cttatcagaa gtggatctca gcagcttcaa aactgtatga ggtggctatt gatgggaaag
601 aagaggactt ggggtcaccc actggagagc taacatctaa gattttaagc agtattaaag
661 tcttggaagg atttttggat attgacacaa aattctcaga aaaccgatgc caaaaagctt
721 tacccatggc ccacagtgcc taccagtcaa atttgcctca taattacaca atgactgtcc
781 ataagaatca gcttgcccag gctcttcgag tgtacagtca acatgctaga ggtccagcat
841 ttcacaaata cgccatgcag ttacatgagg actgctacaa attttggagc aatggccatc
901 agctctgtga ggagaggagt ttaactgatc aacactgtgt gcacaaattt cactcattac
961 ctaaatcagg agaaaaacca gaggctgata gaaatccgcc tgtgctatat cacaatagcc
1021 gagctcgatc tactggtgct tgcaactgtg gaaggaaaca agcacctcga gatgatccct
1081 ttgatatcaa agcagccaat tatgacttct atcagcttct ggaagaaaag tgttgtggaa
1141 aattggatca tatcaatttc ccagtatttg aaccaagtac tccagatcct gctcctgcta
1201 aaaatgaatc ctctcctgct cctccagatt cggatgctga taaacttaaa gaaaaagaac
1261 ctcaaaccca aggagagagc acgagcctga gtttagcttt gagtttgggc caatccacag
1321 atagcttagg tacctatcca gctgatccac aagcaggagg agataatcca gaagttcatg
1381 gtcaagtaga agtgaaaact gagaagaggc caaacttcgt tgatcgacag gcatccacag
1441 ttgagtatct cccaggcatg ctacattcaa attgccctaa aggtctccta cccaaattct
1501 ccagctggtc tttggttaaa ctaggccctg ctaagtctta taactttcat acaggtttgg
1561 accaacaggg ctttattcca ggaacaaatt atcttatgcc ttgggacatt gtcatcagga
1621 ctagagctga agatgaagga gacttagaca caaactcttg gcctgctcca aataaagcta
1681 ttcctggaaa gagaagtgcg gttgtaatgg gaagaggaag acggcgagat gacatagctc
1741 gagcttttgt gggctttgaa tatgaagact ctcgaggtcg gagattcatg tgctctgggc
1801 ctgacaaagt aatgaaagta atgggaagtg ggccaaagga atcagcttta aaagccctaa
1861 atagtgacat gcccttatat attctgtcat cctctcaagg tagagggctg aaacctcatt
1921 atgctcaact tatgaggctt tttgttgtgg ttcctgatgc tcctttgcag ataatactaa
1981 tgcctcaggt tcagccaggc ccaccaccat gtccggtatt ctacccagaa aaacaagaaa
2041 tcacccttcc acctgatggc ctttgggttt tgagatttcc ttatgcatat gtgactgaga
2101 gaggaccttg tttcccccct aaggaaaatg tgcagttaat gagctacaag gtgctccgtg
2161 gggttcttaa ggcagtaaca caataagtgt tttccagcca gttcaatcct atacttgagc
2221 tggtttttgt ttttggtatt tgtggctgtg tttttggtat gtgtttactg tgttttccca
2281 aatccaaaat gtgttttggt tacaggagtt cagtatttgg aaactaattt gttctacttt
2341 ttcattatat tgttgatatt tattgtaaac gtgactacaa ctttctaata aagattggtt
2401 gttctagaaa agaatataaa atacatggat gataaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaa
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