LOCUS BC020905 952 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens anterior pharynx defective 1 homolog B (C. elegans), mRNA (cDNA clone MGC:24164 IMAGE:4720647), complete cds. ACCESSION BC020905 VERSION BC020905.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 952) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 952) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: f Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50726953. FEATURES Location/Qualifiers source 1..952 /db_xref="H-InvDB:HIT000039026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24164 IMAGE:4720647" /tissue_type="Placenta" /clone_lib="NIH_MGC_79" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..952 /gene="APH1B" /gene_synonym="APH-1B" /gene_synonym="DKFZp564D0372" /gene_synonym="PRO1328" /gene_synonym="PSFL" /gene_synonym="TAAV688" /db_xref="GeneID:83464" /db_xref="HGNC:HGNC:24080" /db_xref="MIM:607630" CDS 17..790 /gene="APH1B" /gene_synonym="APH-1B" /gene_synonym="DKFZp564D0372" /gene_synonym="PRO1328" /gene_synonym="PSFL" /gene_synonym="TAAV688" /codon_start=1 /product="anterior pharynx defective 1 homolog B (C. elegans)" /protein_id="AAH20905.1" /db_xref="GeneID:83464" /db_xref="HGNC:HGNC:24080" /db_xref="MIM:607630" /translation="MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLV SLLISSLVWFMARVIIDNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLK SINPGETAPSMRLLAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQFFLYSA FMTLVIILLHVFWGIVFFDGCEKKKWGILLIVLLTHLLVSAQTFISSYYGINLASAFI ILVLMGTWAFLAAGGSCRSLKLCLLCQDKNFLLYNQRSR" BASE COUNT 236 a 230 c 206 g 280 t ORIGIN 1 ggtttccgcg gtggccatga ctgcggccgt gttcttcggc tgcgccttca ttgccttcgg 61 gcctgcgctc gccctttatg tcttcaccat cgccaccgag ccgttgcgta tcatcttcct 121 catcgccgga gctttcttct ggttggtgtc tctactgatt tcgtcccttg tttggttcat 181 ggcaagagtc attattgaca acaaagatgg accaacacag aaatatctgc tgatctttgg 241 agcgtttgtc tctgtctata tccaagaaat gttccgattt gcatattata aactcttaaa 301 aaaagccagt gaaggtttga agagtataaa cccaggtgag acagcaccct ctatgcgact 361 gctggcctat gtttctggct tgggctttgg aatcatgagt ggagtatttt cctttgtgaa 421 taccctatct gactccttgg ggccaggcac agtgggcatt catggagatt ctcctcaatt 481 cttcctttat tcagctttca tgacgctggt cattatcttg ctgcatgtat tctggggcat 541 tgtatttttt gatggctgtg agaagaaaaa gtggggcatc ctccttatcg ttctcctgac 601 ccacctgctg gtgtcagccc agaccttcat aagttcttat tatggaataa acctggcgtc 661 agcatttata atcctggtgc tcatgggcac ctgggcattc ttagctgcgg gaggcagctg 721 ccgaagcctg aaactctgcc tgctctgcca agacaagaac tttcttcttt acaaccagcg 781 ctccagataa cctcagggaa ccagcacttc ccaaaccgca gactacatct ttagaggaag 841 cacaactgtg cctttttctg aaaatccctt tttctggtgg aattgagaaa gaaataaaac 901 tatgcagata tgcgttccat acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //