LOCUS BC020873 1552 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens chloride channel Kb, mRNA (cDNA clone MGC:24087
IMAGE:4608625), complete cds.
ACCESSION BC020873
VERSION BC020873.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1552)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1552)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557474.
FEATURES Location/Qualifiers
source 1..1552
/db_xref="H-InvDB:HIT000039014"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24087 IMAGE:4608625"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1552
/gene="CLCNKB"
/gene_synonym="CLCKB"
/gene_synonym="hClC-Kb"
/db_xref="GeneID:1188"
/db_xref="MIM:602023"
CDS 112..1500
/gene="CLCNKB"
/gene_synonym="CLCKB"
/gene_synonym="hClC-Kb"
/codon_start=1
/product="CLCNKB protein"
/protein_id="AAH20873.1"
/db_xref="GeneID:1188"
/db_xref="MIM:602023"
/translation="MEEFVGLREGSSGNPVTLQELWGPCPRIRRGIRGGLEWLKQKLF
RLGEDWYFLMTLGVLMALVSCAMDLAVESVVRAHQWLYREIGDSHLLRYLSWTVYPVA
LVSFSSGFSQSITPSSGGSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCTLACGST
LFLGKVGPFVHLSVMMAAYLGRVRTTTIGEPENKSKPVYSALATLVLASITYPPSAGR
FLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEWYHPRFTIFGTLAF
FLVMKFWMLILATTIPMPAGYFMPIFVYGAAIGRLFGETLSFIFPEGIVAGGITNPIM
PGGYALAGAAAFSGAVTHTISTALLAFEVTGQIVHALPVLMAVLAANAIAQSCQPSFY
DGTVIVKKLPYLPRILGRNIGSHRVRVEHFMNHSITTLAITLMNDEIGVHCHQGQAQM
ASGVVWFPVRGS"
BASE COUNT 298 a 458 c 457 g 339 t
ORIGIN
1 ggggggagga tgttgattgt tggaacacac acctgtccag gttcagggga gctggaggct
61 ctgtgagagg agggccagct cagccacagc aggaggactg acaggggcct gatggaggag
121 tttgtggggc tgcgtgaagg ctcctcaggg aaccctgtga ctctgcagga gctgtggggc
181 ccctgtcccc gcatccgccg aggcatccga ggtggcctgg agtggctgaa gcagaagctc
241 ttccgcctgg gcgaggactg gtacttcctg atgaccctcg gggtgctcat ggccctggtc
301 agctgtgcca tggacttggc tgttgagagt gtggtccgag cgcaccagtg gctgtacagg
361 gagattgggg acagccacct gctccggtat ctctcctgga ctgtgtaccc tgtggccctc
421 gtctctttct cttcgggctt ctctcagagc atcacaccct cctctggagg ttctggaatc
481 ccggaggtga agaccatgtt ggcgggtgtg gtcttggagg actacctgga tatcaagaac
541 tttggggcca aagtggtggg cctctcctgc accctggcct gtggcagcac cctcttcctc
601 ggcaaagtgg gccctttcgt gcacctgtct gtgatgatgg ctgcctacct gggccgtgtg
661 cgcaccacga ccatcgggga gcctgagaac aagagcaagc ctgtgtactc cgctctggcc
721 accttggttc tcgcctccat cacctaccca cccagcgccg gccgcttcct agcttctcgg
781 ctgtccatga agcagcatct ggactcgctg ttcgacaacc actcctgggc gctgatgacc
841 cagaactcca gcccaccctg gcccgaggag ctcgaccccc agcacctgtg gtgggaatgg
901 taccacccgc ggttcaccat ctttgggacc cttgccttct tcctggttat gaagttctgg
961 atgctgattc tggccaccac catccccatg cctgccgggt acttcatgcc catctttgtc
1021 tatggagctg ctatcgggcg cctctttggg gagactctct cttttatctt ccctgagggc
1081 atcgtggctg gagggatcac caatcccatc atgccagggg ggtatgctct ggcaggggct
1141 gcagccttct caggggctgt gacccacacc atctccacgg cgctgctggc cttcgaggtg
1201 accggccaga tagtgcatgc actgcccgtg ctgatggcgg tgctggcagc caacgccatt
1261 gcacagagct gccagccctc cttctatgat ggcaccgtca ttgtcaagaa gctgccatac
1321 ctgccacgga ttctgggccg caacatcggt tcccaccgcg tgagggtgga gcacttcatg
1381 aaccacagca tcaccacact ggccatcaca ttaatgaatg atgagattgg agtacactgt
1441 caccaagggc aggcacagat ggcttctggg gttgtctggt tcccagtgag aggctcctga
1501 gaaaaataaa gctggttccc agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//