LOCUS BC020707 1116 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens tyrosine aminotransferase, mRNA (cDNA clone IMAGE:4710626), complete cds. ACCESSION BC020707 VERSION BC020707.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1116) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1116) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: c Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507368 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1116 /db_xref="H-InvDB:HIT000038906" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4710626" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1116 /gene="TAT" /db_xref="GeneID:6898" /db_xref="MIM:276600" CDS 97..525 /gene="TAT" /codon_start=1 /product="TAT protein" /protein_id="AAH20707.1" /db_xref="GeneID:6898" /db_xref="MIM:276600" /translation="MDPYMIQMSSKGNLPSILDVHVNVGGRSSVPGKMKGRKARWSVR PSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGELGTLLRGCHCPPLLSCSQAGWR RWQLGVSLSTEHGRITSWLLLCFPPIKRGPYCVWKPAYRP" misc_feature 232..378 /gene="TAT" /note="Bunya_RdRp; Region: Bunyavirus RNA dependent RNA polymerase. The bunyaviruses are enveloped viruses with a genome consisting of 3 ssRNA segments (called L, M and S). The nucleocapsid protein is encode on the small (S) genomic RNA. The L segment codes for an RNA polymerase. This family contains the RNA dependent RNA polymerase on the L segment" /db_xref="CDD:pfam04196" BASE COUNT 305 a 253 c 247 g 311 t ORIGIN 1 attgcccctg taacctgtca aagaagagct aagggagctt tcggggttgg cttcttggag 61 gctgctttct cctttacttg gaaggcttcg ctagtgatgg acccatacat gattcagatg 121 agcagcaaag gcaacctccc ctcaattctg gacgtgcatg tcaacgttgg tgggagaagc 181 tctgtgccgg gaaaaatgaa aggcagaaag gccaggtggt ctgtgaggcc ctcagacatg 241 gccaagaaaa ctttcaaccc catccgagcc attgtggaca acatgaaggt gaaaccaaat 301 ccaaacaaaa ccatgatttc cctgtccatt ggtgagttgg ggacactact gaggggctgt 361 cattgtcctc ctctactctc atgttcacag gctggttgga gaagatggca gttgggggtg 421 agtctgagta ctgaacatgg gagaataacc tcttggctcc ttttgtgttt tcctcccata 481 aaaaggggac cctactgtgt ttggaaacct gcctacagac cctgaagtta cccaggcaat 541 gaaagatgcc ctggactcgg gcaaatataa tggctatgcc ccatccatcg gtaagctcct 601 cctgagactc catacctggt gactgccaaa tctttagtgc tcttataaca ggactaaatg 661 tctagcaatc ctcttcactt tcctgatgca caattcctaa ggagaggcta agattacatg 721 gtcctttgga tttgggaacc gggtctcggg atgcttaaat acaaggcatc aaggtccaac 781 ttctttcctg gctttctttg acatatgggc acttcccctc taggctccca aacatactta 841 tttgtcaagt aaagctccta tcctatcatt actaattcta atctgaaggc cttgagtctg 901 gcaggagctt tgtgtttgct gagcctctag gtcctaaatg gatttactta ttgctctgtg 961 tatatagctc ctttgcttca tttctgcttc tctatgtatt gaaggcctat tttcattatg 1021 gtcctgagca cattgaaatg caattgttac tgtttatgac taacgggttt aaacaaacaa 1081 ataaacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //