LOCUS BC020696 994 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens solute carrier organic anion transporter family,
member 1B1, mRNA (cDNA clone IMAGE:4767073), partial cds.
ACCESSION BC020696
VERSION BC020696.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 994)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 994)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923779.
FEATURES Location/Qualifiers
source 1..994
/db_xref="H-InvDB:HIT000090212"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4767073"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>994
/gene="SLCO1B1"
/gene_synonym="LST-1"
/gene_synonym="OATP-C"
/gene_synonym="OATP1B1"
/gene_synonym="OATP2"
/db_xref="GeneID:10599"
/db_xref="HGNC:HGNC:10959"
/db_xref="MIM:604843"
CDS 106..>994
/gene="SLCO1B1"
/gene_synonym="LST-1"
/gene_synonym="OATP-C"
/gene_synonym="OATP1B1"
/gene_synonym="OATP2"
/codon_start=1
/product="SLCO1B1 protein"
/protein_id="AAH20696.1"
/db_xref="GeneID:10599"
/db_xref="HGNC:HGNC:10959"
/db_xref="MIM:604843"
/translation="MDQNQHLNKTAEAQPSENKKTRYCNGLKMFLAALSLSFIAKTLG
AIIMKSSIIHIERRFEISSSLVGFIDGSFEIGNLLVIVFVSYFGSKLHRPKLIGIGCF
IMGIGGVLTALPHFFMGYYRYSKETNINSSENSTSTLSTCLINQILSLNRASPEIVGK
GCLKESGSYMWIYVFMGNMLRGIGETPIVPLGLSYIDDFAKEGHSSLYLGILNAIAMI
GPIIGFTLGSLFSKMYVDIGYVDLSTIRITPTDSRWVGAWWLNFLVSGLFSIISSIPF
FFLPQTPNKPQKKKKKKKKK"
BASE COUNT 317 a 163 c 188 g 326 t
ORIGIN
1 aaaagggtgg acttgttgca gttgctgtag gattctaaat ccaggtgatt gtttcaaact
61 gagcatcaac aacaaaaaca tttgtatgat atctatattt caatcatgga ccaaaatcaa
121 catttgaata aaacagcaga ggcacaacct tcagagaata agaaaacaag atactgcaat
181 ggattgaaga tgttcttggc agctctgtca ctcagcttta ttgctaagac actaggtgca
241 attattatga aaagttccat cattcatata gaacggagat ttgagatatc ctcttctctt
301 gttggtttta ttgacggaag ctttgaaatt ggaaatttgc ttgtgattgt atttgtgagt
361 tactttggat ccaaactaca tagaccaaag ttaattggaa tcggttgttt cattatggga
421 attggaggtg ttttgactgc tttgccacat ttcttcatgg gatattacag gtattctaaa
481 gaaactaata tcaattcatc agaaaattca acatcgacct tatccacttg tttaattaat
541 caaattttat cactcaatag agcatcacct gagatagtgg gaaaaggttg tttaaaggaa
601 tctgggtcat acatgtggat atatgtgttc atgggtaata tgcttcgtgg aataggggag
661 actcccatag taccactggg gctttcttac attgatgatt tcgctaaaga aggacattct
721 tctttgtatt taggtatatt gaatgcaata gcaatgattg gtccaatcat tggctttacc
781 ctgggatctc tgttttctaa aatgtacgtg gatattggat atgtagatct aagcactatc
841 aggataactc ctactgattc tcgatgggtt ggagcttggt ggcttaattt ccttgtgtct
901 ggactattct ccattatttc ttccatacca ttctttttct tgccccaaac tccaaataaa
961 ccacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//