LOCUS BC020682 983 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens OTU domain containing 4, mRNA (cDNA clone
IMAGE:4804803), partial cds.
ACCESSION BC020682
VERSION BC020682.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 983)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 983)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: o Column: 4.
FEATURES Location/Qualifiers
source 1..983
/db_xref="H-InvDB:HIT000090207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4804803"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..>983
/gene="OTUD4"
/gene_synonym="DKFZp434I0721"
/gene_synonym="HIN1"
/gene_synonym="HSHIN1"
/db_xref="GeneID:54726"
/db_xref="HGNC:HGNC:24949"
CDS <1..>983
/gene="OTUD4"
/gene_synonym="DKFZp434I0721"
/gene_synonym="HIN1"
/gene_synonym="HSHIN1"
/codon_start=2
/product="OTUD4 protein"
/protein_id="AAH20682.1"
/db_xref="GeneID:54726"
/db_xref="HGNC:HGNC:24949"
/translation="FPCNEKGDRAIVPPYSLCQTGEDLPKDKNILRFFFNLGVKAYSC
PMWAPHSYLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPM
QTEASVNGQMPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYE
ESLSGKNMFPQPSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDE
KGELDLSLENLDLSKDCGSVSTVDEFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTR
KADTALASILPVAEGKAHPPTQILNRERETVPVELEPKRTIQKKKKKKKKK"
BASE COUNT 272 a 238 c 213 g 260 t
ORIGIN
1 gtttccttgt aatgaaaagg gagatcgagc cattgtacca ccttattcac tgtgtcagac
61 tggggaggac ctacctaaag ataagaatat tcttcgattc ttcttcaatc ttggtgtgaa
121 ggcatacagt tgtcctatgt gggccccaca ttcttacctg taccctctgc accaggccta
181 cctggcagcc tgcaggatgt acccaaaggt ccctgtccct gtttatcctc ataatccctg
241 gttccaagag gctcctgctg ctcagaatga aagtgattgt acctgtactg atgcccactt
301 tcctatgcag actgaggcca gtgttaatgg tcaaatgcca cagccagaga ttggaccgcc
361 gacattttct tcacctctgg ttatccctcc atctcaggtg tctgaaagtc atggacaatt
421 gtcttaccag gctgatcttg aatctgagac ccctgggcag cttctgcatg ctgattatga
481 agagtcacta agtggcaaga atatgttccc ccagccatct tttggaccca atccattctt
541 aggcccagtt cctattgcac ctcctttctt tcctcatgtt tggtatgggt acccttttca
601 gggattcata gaaaatccag taatgaggca gaatattgtc ctgccctctg atgaaaaagg
661 agaattggat ctgtctctgg aaaatctgga tctgtctaaa gattgtggtt cagtttcaac
721 agtagatgag tttccagaag ccaggggtga acatgtacat tctctccctg aagcaagtgt
781 gagcagtaag ccggacgaag gccggacaga gcaatcttcc cagacacgaa aggcagatac
841 ggcattggct tccatccttc ctgtagcaga gggaaaggct catcctccca ctcagattct
901 aaacagagag agagaaactg tgcctgttga acttgaacct aaaaggacca ttcaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaa
//