LOCUS BC020611 1719 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome X open reading frame 21, mRNA (cDNA clone
MGC:22215 IMAGE:4768735), complete cds.
ACCESSION BC020611
VERSION BC020611.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376758.
FEATURES Location/Qualifiers
source 1..1719
/db_xref="H-InvDB:HIT000038847"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22215 IMAGE:4768735"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1719
/gene="CXorf21"
/gene_synonym="FLJ11577"
/db_xref="GeneID:80231"
/db_xref="HGNC:HGNC:25667"
CDS 324..1229
/gene="CXorf21"
/gene_synonym="FLJ11577"
/codon_start=1
/product="chromosome X open reading frame 21"
/protein_id="AAH20611.1"
/db_xref="GeneID:80231"
/db_xref="HGNC:HGNC:25667"
/translation="MLSEGYLSGLEYWNDIHWSCASYNEQVAGEKEEETNSVATLSYS
SVDETQVRSLYVSCKSSGKFISSVHSRESQHSRSQRVTVLQTNPNPVFESPNLAAVEI
CRDASRETYLVPSSCKSICKNYNDLQIAGGQVMAINSVTTDFPSESSFEYGPLLKSSE
IPLPMEDSISTQPSDFPQKPIQRYSSYWRITSIKEKSSLQMQNPISNAVLNEYLEQKV
VELYKQYIMDTVFHDSSPTQILASELIMTSVDQISLQVSREKNLETSKARDIVFSRLL
QLMSTEITEISTPSLHISQYSNVNP"
BASE COUNT 562 a 313 c 397 g 447 t
ORIGIN
1 acaaatcgga cttgaacaaa aacaactctt tttccatggg accaattata aaaagaatgg
61 ctttgcactg agcagctcag tctactggtc tcatcagtga aaggcttgtg aaaatttctg
121 gaaagagcat tggctggctt gttcatctct ctgtttggtc agttgctgtg tttctgccgg
181 atcagatgag cagattggtt agtgaaggtc agtgtgagaa gaagattgtt tctgagcttg
241 agaagcttct ggaggattga agagtatttg aagtctgtgt caaacatcca tatcataagt
301 ggaattttgg agatattcaa agaatgctgt cagaagggta tctcagtgga cttgagtact
361 ggaatgacat ccactggagt tgtgcctctt ataatgagca ggtggctggg gaaaaggaag
421 aggagacaaa ttctgttgct accctttcct attcctctgt ggatgaaaca caagtcagaa
481 gtctctacgt gagctgcaaa tcatctggca agtttatctc ttcagtgcat tcaagagaga
541 gccaacatag cagaagtcag agagtcacag tgctgcagac aaaccccaat cctgtgtttg
601 aaagcccaaa cttggctgca gttgaaatat gtagagatgc cagcagagag acctacttgg
661 ttccatcttc ttgcaaaagt atttgcaaga attataatga cttacagatt gcagggggcc
721 aggtgatggc cattaattca gtgacaacag attttccctc tgagagcagt tttgaatatg
781 gccctttgct gaagtcatct gagattcctt tacccatgga ggattccatt tctactcagc
841 ccagtgactt tccccaaaaa cctatccagc ggtactcatc ctattggaga ataacaagca
901 tcaaagagaa aagcagcttg caaatgcaga atcctatttc taatgcagtg ctgaatgagt
961 acctggagca gaaggttgtg gagttatata aacagtacat tatggacacc gtgtttcatg
1021 acagttctcc tacccagatt ctggcgtctg aactcatcat gacaagtgta gaccaaatca
1081 gtcttcaagt gtctagagag aagaatctgg agacctcaaa agccagagat atagtcttta
1141 gccgcctatt gcaattgatg tcaactgaaa ttactgaaat tagcactcct agtctccata
1201 tttctcagta tagcaatgta aatccataga gaggatgctt ccattactgt ctcgcattta
1261 cttaaacatg aagcaacact ttatccattt attctgagaa tgtgcaggag gggttagtga
1321 aggggaatta agggctagag aagtaaagat cagctggaag tcatgtgtga atcatggaga
1381 aatctcataa tattacactt gatgaaggaa tatggtaaga ggagccataa ggaatgattt
1441 caaagagagg tgtgtacagc aaggaagcaa aaataaaaat gatcaaaaaa gaaacggtta
1501 attcatttga agaaacatag gaattaaaaa agaagacagt caaatgagat gaaacaaaaa
1561 ggccaaaagg tagccgggtg tagtggctca cgcctgtaat cccagcattt gggaggctga
1621 tgtgggtgga ttacctgacg tcaggaattc gagaccggcc tggccaatat ggtgaaaccc
1681 catctctacc aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//