LOCUS BC020601 1318 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, mRNA (cDNA
clone IMAGE:4730802), complete cds.
ACCESSION BC020601
VERSION BC020601.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1318)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1318)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: g Column: 24
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1318
/db_xref="H-InvDB:HIT000038843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4730802"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1318
/gene="DDX60"
/db_xref="GeneID:55601"
/db_xref="HGNC:HGNC:25942"
CDS 96..647
/gene="DDX60"
/codon_start=1
/product="DDX60 protein"
/protein_id="AAH20601.1"
/db_xref="GeneID:55601"
/db_xref="HGNC:HGNC:25942"
/translation="MKIMEDFTTFLRIVSKLADMNQEYQLPLSKIKFTGKECEDSQLV
SHLMSCKEGRVAISPFVCLSGNFDDDLLRLETPNHVTLGTIGVNRSQAPVLLSQKFDN
RGRKMSLNAYALDFYKHGSLIGLVQDNRMNEGDAYYLLKDFALTIKSISVSLRELCEN
EDDNVVLAFEQLSTTFWEKLNKV"
BASE COUNT 469 a 204 c 232 g 413 t
ORIGIN
1 caaagttcca agatgcacac ttcgagtttt atcaatcaaa ggtgttcctt gatgatctcc
61 ctgaggattt tagtgatgct ttagatgaat ataacatgaa aattatggag gactttacca
121 ctttcctacg aattgtttcc aaactggctg atatgaatca ggaatatcaa ctcccattgt
181 caaaaatcaa attcacaggt aaagaatgtg aagactctca actcgtatct catttgatga
241 gctgcaagga aggaagagta gcaatttcac catttgtttg tctgtctggg aactttgatg
301 atgatttgct tcgactagaa actccaaacc atgttactct aggcacaatc ggtgtcaatc
361 gctctcaggc tccagtgctg ttgtcacaga aatttgataa ccgaggaagg aaaatgtcgc
421 ttaatgccta tgcactggat ttctacaaac atggttcctt gataggatta gtccaggata
481 acaggatgaa tgaaggagat gcttattatt tgttgaagga ttttgcactc accattaaat
541 ctatcagtgt ttccttgcgt gagctatgtg aaaatgaaga cgacaacgtt gtcttagcct
601 ttgaacaact gagtacaact ttttgggaaa agttaaacaa agtctaaaaa caaagtctat
661 gcaaaccact taaaaataat tccatagtag tttttcaggt cacgtttttg attcttatgc
721 ttcttgccag aaatacatta tgataaagtg gaaatacatt acgatgaagt ggaaagagca
781 aacactttgg aatcaaacag agttgcaatc aaacctgcca tgttctgtca tgaatactca
841 caaattattt agtatacctg aatcttggtt tctttttata actgagtaat aatggttaca
901 tctcaggtag tttgaggatt gactaaaaaa atgcgagaat gttgtatgtg actgaataac
961 aatttttact ctgcgaagcc aaagtaaata taatattatc agtaacttta tccccagtgt
1021 cagtatttat aaaatgttta ttaaggctag aaaaaatgaa tacaatatcc tgaaggtgaa
1081 atatattctc ttcaattagc ataaatatga tttacataag ttagctatac agctattgag
1141 atagtacttt ctagtaaact taaactactt tttaaacata cattttgtga tgatttaaca
1201 aaaatataga gaatgatttg ctttattgta attgtatata agtgactgga aaagcacaaa
1261 gaaataaagt gggttcgatc tgtttaacaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//