LOCUS BC020590 1780 bp mRNA linear HUM 17-NOV-2006 DEFINITION Homo sapiens anterior pharynx defective 1 homolog A (C. elegans), mRNA (cDNA clone MGC:22065 IMAGE:4420942), complete cds. ACCESSION BC020590 VERSION BC020590.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1780) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1780) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: k Column: 9. FEATURES Location/Qualifiers source 1..1780 /db_xref="H-InvDB:HIT000038838" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22065 IMAGE:4420942" /tissue_type="Adrenal cortex, carcinoma" /clone_lib="NIH_MGC_84" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1780 /gene="APH1A" /gene_synonym="6530402N02Rik" /gene_synonym="APH-1A" /gene_synonym="CGI-78" /db_xref="GeneID:51107" /db_xref="HGNC:HGNC:29509" /db_xref="MIM:607629" CDS 190..987 /gene="APH1A" /gene_synonym="6530402N02Rik" /gene_synonym="APH-1A" /gene_synonym="CGI-78" /codon_start=1 /product="anterior pharynx defective 1 homolog A (C. elegans)" /protein_id="AAH20590.1" /db_xref="GeneID:51107" /db_xref="HGNC:HGNC:29509" /db_xref="MIM:607629" /translation="MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLV SLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLA SLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTS AFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIY AVTVSMGLWAFITAGGSLRSIQRSLLCRRQEDSRVMVYSALRIPPED" BASE COUNT 357 a 453 c 483 g 487 t ORIGIN 1 aggaagtggc gcggaccttc atttggggtt tcggttcccc cccttcccct tccccggggt 61 ctgggggtga cattgcaccg cgcccctcgt ggggtcgcgt tgccacccca cgcggactcc 121 ccagctggcg cgcccctccc atttgcctgt cctggtcagg cccccacccc ccttcccacc 181 tgaccagcca tgggggctgc ggtgtttttc ggctgcactt tcgtcgcgtt cggcccggcc 241 ttcgcgcttt tcttgatcac tgtggctggg gacccgcttc gcgttatcat cctggtcgca 301 ggggcatttt tctggctggt ctccctgctc ctggcctctg tggtctggtt catcttggtc 361 catgtgaccg accggtcaga tgcccggctc cagtacggcc tcctgatttt tggtgctgct 421 gtctctgtcc ttctacagga ggtgttccgc tttgcctact acaagctgct taagaaggca 481 gatgaggggt tagcatcgct gagtgaggac ggaagatcac ccatctccat ccgccagatg 541 gcctatgttt ctggtctctc cttcggtatc atcagtggtg tcttctctgt tatcaatatt 601 ttggctgatg cacttgggcc aggtgtggtt gggatccatg gagactcacc ctattacttc 661 ctgacttcag cctttctgac agcagccatt atcctgctcc ataccttttg gggagttgtg 721 ttctttgatg cctgtgagag gagacggtac tgggctttgg gcctggtggt tgggagtcac 781 ctactgacat cgggactgac attcctgaac ccctggtatg aggccagcct gctgcccatc 841 tatgcagtca ctgtttccat ggggctctgg gccttcatca cagctggagg gtccctccga 901 agtattcagc gcagcctctt gtgccgacgg caggaggaca gtcgggtgat ggtgtattct 961 gccctgcgca tcccacccga ggactgaggg aacctagggg ggacccctgg gcctggggtg 1021 ccctcctgat gtcctcgccc tgtatttctc catctccagt tctggacagt gcaggttgcc 1081 aagaaaaggg acctagttta gccattgccc tggagatgaa attaatggag gctcaaggat 1141 agatgagctc tgagtttctc agtactccct caagactgga catcttggtc tttttctcag 1201 gcctgagggg gaaccatttt tggtgtgata aataccctaa actgcctttt tttctttttt 1261 gaggtggggg gagggaggag gtatattgga actcttctaa cctccttggg ctatattttc 1321 tctcctcgag ttgctcctca tggctgggct catttcggtc cctttctcct tggtcccaga 1381 ccttggggga aaggaaggaa gtgcatgttt gggaactggc attactggaa ctaatggttt 1441 taacctcctt aaccaccagc atccctcctc tccccaaggt gaagtggagg gtgctgtggt 1501 gagctggcca ctccagagct gcagtgccac tggaggagtc agactaccat gacatcgtag 1561 ggaaggaggg gagatttttt tgtagttttt aattggggtg tgggaggggc ggggaggttt 1621 tctataaact gtatcatttt ctgctgaggg tggagtgtcc catcctttta atcaaggtga 1681 ttgtgatttt gactaataaa aaagaatttg taaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //