LOCUS BC020521 4516 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FERM domain containing 6, mRNA (cDNA clone MGC:17921
IMAGE:3914276), complete cds.
ACCESSION BC020521
VERSION BC020521.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4516)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC020521.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303929.
FEATURES Location/Qualifiers
source 1..4516
/db_xref="H-InvDB:HIT000038804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17921 IMAGE:3914276"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4516
/gene="FRMD6"
/gene_synonym="c14_5320"
/gene_synonym="EX1"
/gene_synonym="MGC17921"
/gene_synonym="Willin"
/db_xref="GeneID:122786"
/db_xref="HGNC:HGNC:19839"
CDS 234..2078
/gene="FRMD6"
/gene_synonym="c14_5320"
/gene_synonym="EX1"
/gene_synonym="MGC17921"
/gene_synonym="Willin"
/codon_start=1
/product="FERM domain containing 6"
/protein_id="AAH20521.1"
/db_xref="GeneID:122786"
/db_xref="HGNC:HGNC:19839"
/translation="MNKLNFHNNRVMQDRRSVCIFLPNDESLNIIINVKILCHQLLVQ
VCDLLRLKDCHLFGLSVIQNNEHVYMELSQKLYKYCPKEWKKEASKGIDQFGPPMIIH
FRVQYYVENGRLISDRAARYYYYWHLRKQVLHSQCVLREEAYFLLAAFALQADLGNFK
RNKHYGKYFEPEAYFPSWVVSKRGKDYILKHIPNMHKDQFALTASEAHLKYIKEAVRL
DDVAVHYYRLYKDKREIEASLTLGLTMRGIQIFQNLDEEKQLLYDFPWTNVGKLVFVG
KKFEILPDGLPSARKLIYYTGCPMRSRHLLQLLSNSHRLYMNLQPVLRHIRKLEENEE
KKQYRESYISDNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSSHTSGIEAD
TKPRDTGPEDSYSSSAIHRKLKTCSSMTSHGSSHTSGVESGGKDRLEEDLQDDEIEML
VDDPRDLEQMNEESLEVSPDMCIYITEDMLMSRKLNGHSGLIVKEIGSSTSSSSETVV
KLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAGLCQDTAQSYTFGCG
HELDEEGLYCNSCLAQQCINIQDAFPVKRTSKYFSLDLTHDEVPEFVV"
BASE COUNT 1346 a 898 c 985 g 1287 t
ORIGIN
1 gaggagtggg gcaggctcgg cgccggtagg aagagtcaga ggggtgacca gagagcccaa
61 cgcctggtgc tcaagacttt ctccgagcta tgaaacccac gtagtcgaac accgtgatgc
121 ttctcctgca gggcgtgtga tgaggaggcg agcttggctt tggagtgctg ggaacctgag
181 gaattgccaa ggacccagag cccagccctg accaccagag tgcccaaaac acaatgaaca
241 aattgaattt tcataacaac agagtcatgc aagaccgccg cagtgtgtgc attttccttc
301 ccaacgatga atctctgaac atcatcataa atgttaagat tctgtgtcac cagttgctgg
361 tccaggtttg tgacctgctc aggctaaagg actgccacct ctttggactc agtgttatac
421 aaaataatga acatgtgtat atggagttgt cacaaaagct ttacaaatat tgtccaaaag
481 aatggaagaa agaggccagc aagggtatcg accaatttgg gcctcctatg atcatccact
541 tccgtgtgca gtactatgtg gaaaatggca gattgatcag tgacagagca gcaagatact
601 attattactg gcacctgaga aaacaagttc ttcattctca gtgtgtgctc cgagaggagg
661 cctacttcct gctggcagcc tttgccctgc aggctgatct tgggaacttc aaaaggaata
721 agcactatgg aaaatacttc gagccagagg cttacttccc atcttgggtt gtttccaaga
781 gggggaagga ctacatcctg aagcacattc caaacatgca caaagatcag tttgcactaa
841 cagcttccga agctcatctt aaatatatca aagaggctgt ccgactggat gacgtcgctg
901 ttcattacta cagattgtat aaggataaaa gggaaattga agcatcgctg actcttggat
961 tgaccatgag gggaatacag atttttcaga atttagatga agagaaacaa ttactttatg
1021 atttcccctg gacaaatgtt ggaaaattgg tgtttgtggg taagaaattt gagattttgc
1081 cagatggctt gccttctgcc cggaagctca tatactacac ggggtgcccc atgcgctcca
1141 gacacctcct gcaacttctg agcaacagcc accgcctcta tatgaatctg cagcctgtcc
1201 tgcgccatat ccggaagctg gaggaaaacg aagagaagaa gcagtaccgg gaatcttaca
1261 tcagtgacaa cctggacctc gacatggacc agctggaaaa acggtcgcgg gccagcggga
1321 gcagtgcggg cagcatgaaa cacaagcgcc tgtcccgtca ttccaccgcc agccacagca
1381 gttcccacac ctcgggcatt gaggcagaca ccaagccccg ggacacgggg ccagaagaca
1441 gctactccag cagtgccatc caccgcaagc tgaaaacctg cagctcaatg accagtcatg
1501 gcagctccca cacctcaggg gtggagagtg gcggcaaaga ccggctggaa gaggacttac
1561 aggacgatga aatagagatg ttggttgatg acccccggga tctggagcag atgaatgaag
1621 agtctctgga agtcagccca gacatgtgca tctacatcac agaggacatg ctcatgtcgc
1681 ggaagctgaa tggacactct gggttgattg tgaaagaaat tgggtcttcc acctcgagct
1741 cttcagaaac agttgttaag cttcgtggcc agagtactga ttctcttcca cagactatat
1801 gtcggaaacc aaagacctcc actgatcgac acagcttgag cctcgatgac atcagacttt
1861 accagaaaga cttcctgcgc attgcaggtc tgtgtcagga cactgctcag agttacacct
1921 ttggatgtgg ccatgaactg gatgaggaag gcctctattg caacagttgc ttggcccagc
1981 agtgcatcaa catccaagat gcttttccag tcaaaagaac cagcaaatac ttttctctgg
2041 atctcactca tgatgaagtt ccagagtttg ttgtgtaaag tccgtctgtg tgcagctgta
2101 caggcagctt actgtttgct agaggatgcg aaagtcataa gttctttaca tattacttgt
2161 gccatatctt cttcacccta aacatagctc tttctttata atatttgtga tgatggaaac
2221 aaaagccttg gaacaattgc actttaagta ttacacagaa gtaaaagaac tacagaaaat
2281 gtacagcaag acaagtgccc ggaagttcac tgatccttca gaaggaaatg cgctttactg
2341 attgcaaagc cttcagaata ttggagtgtg gtgtgtttgc tcatctgatg ctttttagtt
2401 cagttacatg taacatcaca ttttttatca cgtgaaagat gttagatttg tttgcttata
2461 aattttttac cactcccaca taaaatgctc atagtttggg agaggaaaga gggaagattc
2521 tctcttcttt taacagagag atgattgctc tgtataccca ttgcttcctc cctgaggctg
2581 tcccaaagtg aacactgatg gagtggtcaa aatcataagg ttgtagcaag ccaaagatac
2641 gtatgtgaca gaagcacata agcaataagc agaaaaccag aagtgcatgc tgtgatgcct
2701 gtgactcctt catcccgctc agtgccatgt cctcttttgt gatcttccag aaagctccag
2761 gattcatttg agttccacat ccaagtaaca gatgaattat attcatgttg taatgcattt
2821 tgtggagttt acaaaaccag tgtctgttaa aactttggaa aatgtcttag aaaacgttgg
2881 tgcttggtga tgctttattt gtttaattat caagaacaaa ttatggcaat gctagtttct
2941 gcttaaccaa aatactctgt gtatatatta tacatatata aatacatggg attgtgtatg
3001 tctatatgtg tttaaagctt actatgtctt cattttggct tccatgacta tcttttatac
3061 atggaattcc ttaagattga gaatatgtca ctgagtgaat gatacctgca gacagtcagt
3121 tgatatatgt agagttcaga atgactgttt tctcatgtgc ctttggccat gattctcaac
3181 actgattgta taacagaatt ttggggggag cttttaaaaa ataatgactg agtctcccac
3241 cagaccgatt acatcattct cttgtggcgg gacccaagta gaattgcctt ttcttttaaa
3301 gttctccaga tggagctaat atgcaacaaa gttgaaaacc actgatcctg ggggtgtctt
3361 gttaattttg aagtaaaagt gtacagaaga cgtagtgtat gagaaagggc catttttaag
3421 acagttacct gttgtgctgc tgttacaata tataatgaaa ccaagtcagg ggagtgaatt
3481 tatcaatctt ttgatgtaaa gtaaaaacgt agttcacact tcaggagaga acttcatagc
3541 acaatgtctt tctataagat atttttaatg atttagtatt ttacaacatt tgtttaccat
3601 attttgatat accatttttt tctatctgcc cagttttatt aaaaaaacta tatattattt
3661 tctaaagaaa caatcatatt tttatacaaa attatgtttt caggtaacga aatagatgta
3721 gggtacagtg gaacataagc agtgttaccc ctggctggga gtcagtatta tacaacaaat
3781 ggtgagctgg aacatgccct gtctgtgctg tccctcctgt gctgggtcgc ggatgtgtag
3841 gcaacattgc cttatcacgc taggttcacc tgacacttta aaaggaaaaa aagttccata
3901 gagttctgtg gtcacaaaat tgttttgctt ttatcaaata ctttaataga accaaagttg
3961 cagatattgg aatgtatgga agtatctcag tctctgcata agaggattaa agtatgaaag
4021 gatcatttaa tgactgtttt acttataagt cattaagtaa tccaccattt cttatggatg
4081 atgcttaagc ctggtgaggt ttgtactcta aggagcccag atcataatgc agtgcatttc
4141 cttagccctt agagtttctt gcaaacattt aaaaaaagac atatttaaga aagaagataa
4201 agaaaaaaca tatttaatta ctgtaaacag gtactgcttt atgtttattt tctctctact
4261 tcaaccaaaa tcagatcttt gaggttttgc tgacattgtt ggtggttttg cacatgttct
4321 ttctaattgg atttatgaat agttctatgg gttttcaaag atgaatcatg ctaagaacac
4381 ttctgctttt tgatccactg tttgcagcag aattatatat atgtatagga aaaatccact
4441 ttgaataatc catgttttgt atttggaaat tgtttttaaa aataaaaagg aaaggaaata
4501 taaaaaaaaa aaaaaa
//