LOCUS BC020516 3562 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens interferon regulatory factor 2 binding protein 2, mRNA
(cDNA clone IMAGE:3882977), partial cds.
ACCESSION BC020516
VERSION BC020516.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3562)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: a Column: 3.
FEATURES Location/Qualifiers
source 1..3562
/db_xref="H-InvDB:HIT000090153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3882977"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3562
/gene="IRF2BP2"
/db_xref="GeneID:359948"
CDS <1..683
/gene="IRF2BP2"
/codon_start=3
/product="IRF2BP2 protein"
/protein_id="AAH20516.1"
/db_xref="GeneID:359948"
/translation="EPEGEVGPPKINGEAQPWLSTSTEGLKIPMTPTSSFVSPPPPTA
SPHSNRTTPPEAAQNGQSPMAALILVADNAGGSHASKDANQVHSTTRRNSNSPPSPSS
MNQRRLGPREVGGQGAGNTGGLEPVHPASLPDSSLATSAPLCCTLCHERLEDTHFVQC
PSVPSHKFCFPCSRQSIKQQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDV
KVKKERDS"
BASE COUNT 980 a 690 c 733 g 1159 t
ORIGIN
1 cagaaccaga aggtgaagtc gggcccccta agatcaacgg agaggcccag ccgtggctgt
61 ccacatccac agaggggctc aagatcccca tgactcctac atcctctttt gtgtctccgc
121 caccacccac tgcctcacct cattccaacc ggaccacacc gcctgaagcg gcccagaatg
181 gccagtcccc catggcagcc ctgatcttag tagcagacaa tgcagggggc agtcatgcct
241 caaaagatgc caaccaggtt cactccacta ccaggaggaa tagcaacagt ccgccctctc
301 cgtcctctat gaaccaaaga aggctgggcc ccagagaggt ggggggccag ggagcaggca
361 acacaggagg actggagcca gtgcaccctg ccagcctccc ggactcctct ctggcaacca
421 gtgccccgct gtgctgcacc ctctgccacg agcggctgga ggacacccat tttgtgcagt
481 gcccgtccgt cccttcgcac aagttctgct tcccttgctc cagacaaagc atcaaacagc
541 agggagctag tggagaggtc tattgtccca gtggggaaaa atgccctctt gtgggctcca
601 atgtcccctg ggcctttatg caaggggaaa ttgcaaccat ccttgctgga gatgtgaaag
661 tgaaaaaaga gagagactcg tgacttttcc ggtttcagaa aaacccaatg attaccctta
721 attaaaactg cttgaattgt atatatatct ccatatatat atatatccaa gacaagggaa
781 atgtagactt cataaacatg gctgtataat tttgattttt tttgaataca ttgtgtttct
841 atattttttt tgacgacaaa aggtatgtac ttataaagac atttttttct tttgttaacg
901 ttattagcat atctttgtgc tttattatcc tggtgacagt taccgttcta tgtaggctgt
961 gacttgcgct gcttttttag agcacttggc aaatcagaaa tgcttctagc tgtatttgta
1021 tgcacttatt ttaaaaagaa aaaagccaaa tacattttct gacattgtaa gattgcctta
1081 ctgtctgtca ttccttattg ctggcccctt tctcaggccg gaggccaagt ggtggagaag
1141 gaaaggaaat gatcgaacgg gcatgttgtc aagtgggcat gccactggga aataccacca
1201 gtttaccctg aaacattgtc ctcagaggag taggaaagtg gattttgaat ctctattttg
1261 ctcaaaagtt cagttcctga gatactgatg actgagagtg ctgctgggaa attttcagga
1321 ttgtgtggtc ttttggggtt ttttgttttt ttttttttaa gacaaagttg accgctgttc
1381 actgtccacg tgatcagttg taagattaca atgctgcatg ctagttggtt acataagata
1441 caattccagt gatggaaggc ggttataatg gatggtggtg tgtacaagat ggcactgcca
1501 tctttgagca gagcccagct ctgcagcgcc acttcatctt tttaaacacc ctagaggtct
1561 gtttgttgtt gctgttgtcc tttattttga aagagttgca agagaagtta cagtccaggt
1621 gaacttggag attgtgggat tggttttgtt tctgttttgt tttgtttatc atttacctgt
1681 agtgctattg ctgttgatac tatcacctat accctgtttc tagtgagtgc tgaatacagt
1741 atggtacaat gacagtaaca gccgcgtggt gctgccagga ctgcccttgg gcatatcagt
1801 gacagcccaa atgtgggtgg aggaaacctg taatttcctt cttaacatgt gtttgaaata
1861 ccaagtgaat aatactgttc tggaaaaaaa tgataaacta gtggaaatta aagaaattaa
1921 gggttttata taatagacag gccccacctc tcaaaatatt tttagaagtc tttttgtaaa
1981 ctaatttctt ttgatcacta ttttgcatca gtaaaatgat ttttttaaaa ccaataaatc
2041 atcaattatt agaaatagtt gtctcacagt gatactggtt tttcttttgt gctgttatga
2101 tttaacattg acaggaacac tattttaaat ccttacgttc aggtgtttgt aacttggcct
2161 tataattagg ctgaattatg gcttcaaggt ctacaattta tgtgtatggt tcacagccta
2221 gcttctattt acatttgaaa atacagattt ttaccaactt tggattcttt tttagttata
2281 tgtttgtctt tcctttttaa attgttcaaa actatttttt aatggtcaag ttactaacac
2341 ttgaaaatca gatactgcac caaatacagt gtttttccgt agtgttttta atgagtgcac
2401 ctattactac tgtgcgagaa ttcatgtttt accagtcatt gttatattac aaacagactt
2461 gcatgattaa ccagttgtta cacttacttt ttcaagttgg agtatatatg actcagtgca
2521 gactggtctc tcttatgtga atgcacacat gcagaaatgc agagtcaatt ttacatgccc
2581 ataaagacat ttgtaaagaa ttcagctctt atggtctgtt gtataaatgt gtatctaggc
2641 actttggaat ttgacctcac agatgttaca acttgatcag tcgtttgacc taatttgtgg
2701 tagctatctg tatgttttgc aatcttaata cagacatgct ttccaaaaag attaatacag
2761 aaccatcctg ccgttttgga taagtctatc cagctgtgga aagggcaacc tgtggtttct
2821 ctgtactggt gtttaatggg ggaagaatat gaacagcttt aaagagctgt gtattgtggt
2881 tactactatt aaaaaataag atctgcacga gtctgactgg cctttgggtg gcctttgtgg
2941 acggctcgta gctggaaagt gttgatctgg gttttctggc attcttttaa gttaaaaagt
3001 taacatcggg acatgggttt gatcttttgt tgtacctgat gacagtgcag agattctcca
3061 cagctggata aaaatgtcac aaagctactt actgtacatg ggcagtatca gatttcaaat
3121 cctaatattt cagctgtgct tttaatactc aaaatattag gggatggggt gttgaagctt
3181 tccctttttt gcttttaaca atttatagaa tttaacagat gtactgtctt tcatgtggcc
3241 tcacatttaa agttatgaga acatacacat ggtttacaac ttttactata tacctttcct
3301 tggccaccaa gtattttaaa agtgtgccac cttttaacct ttactttttt taagttgaag
3361 gtgatacttt ttctatatat gatgaaactc atgtcaactg aagtgagtgt aatctcagat
3421 accaacatta ttatatttta aaatcacgct atggaaatat cacctgaatt ctgtcatttg
3481 tcagatttac agtacctttt tttctttaac ttttagcatt aaataaaaat aaaattggga
3541 gcactgaaaa aaaaaaaaaa aa
//