LOCUS BC020498 2472 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens coatomer protein complex, subunit gamma, mRNA (cDNA
clone IMAGE:3903594), partial cds.
ACCESSION BC020498
VERSION BC020498.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2472)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2472)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: h Column: 23.
FEATURES Location/Qualifiers
source 1..2472
/db_xref="H-InvDB:HIT000038789"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3903594"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2472
/gene="COPG"
/gene_synonym="COPG1"
/db_xref="GeneID:22820"
CDS <1..2101
/gene="COPG"
/gene_synonym="COPG1"
/codon_start=2
/product="COPG protein"
/protein_id="AAH20498.2"
/db_xref="GeneID:22820"
/translation="RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVT
RHGLKSPFAYCMMIRVASKQLEEEDGSRDSPLFDFIESCLRNKHEMVVYEAASAIVNL
PGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTD
SNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYPRK
HAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVL
ATRILHLLGQEGPKTTNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSI
LVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTL
EPSEKPFDLKSVPLATAPMAEQRTESTPITAVKQPEKVAATRQEIFQEQLAAVPEFRG
LGPLFKSSPEPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEP
TEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGE
TDDEGYEDEYVLEDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEE
AVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVT
ARSLEELPVDIILASVG"
misc_feature 2..2083
/gene="COPG"
/gene_synonym="COPG1"
/note="SEC21; Region: COG5240, SEC21, Vesicle coat complex
COPI, gamma subunit [Intracellular trafficking and
secretion]"
/db_xref="CDD:COG5240"
BASE COUNT 631 a 642 c 631 g 568 t
ORIGIN
1 gcgctgggtg aatgaggctc aggaggcagc atccagtgat aacatcatgg tccagtacca
61 cgcactaggg ctcctgtacc atgtgcgtaa gaatgaccgc ctagccgtca ataagatgat
121 cagcaaggtc acacggcatg gccttaagtc tccctttgcc tactgcatga tgatccgggt
181 ggccagcaag cagctggaag aggaggatgg cagccgtgac agcccactgt ttgacttcat
241 cgagagctgc ttgcgcaaca agcacgagat ggtggtgtat gaagccgcct cggccatcgt
301 caatctgcca ggctgcagtg ccaaagagct ggccccggct gtgtcagtgc tccagctttt
361 ctgcagctca cccaaggctg ctctccgcta tgctgctgtt cgtaccctca ataaggttgc
421 catgaagcat ccgtcagctg tgacagcttg taatctggat ctggagaacc tggtcacaga
481 ttcaaaccgc agcattgcca cgctggccat caccaccctc cttaagacgg gcagcgagag
541 cagcatcgac cgcctcatga agcagatctc ctccttcatg tcagaaattt cggatgaatt
601 caaggtggtg gttgtccagg ccatcagtgc cctgtgtcag aaatatcctc gcaaacacgc
661 cgtccttatg aacttcctgt tcaccatgct gcgggaagag ggtggctttg agtataagcg
721 cgctatcgtg gactgcatca tcagcatcat tgaagagaac tcagagagca aggagacagg
781 gctgtcacat ctgtgcgagt tcatcgagga ctgcgagttc acagtgctgg ccacccgtat
841 tctacatctc ctgggccagg aggggcccaa gaccaccaat ccctcaaagt acatccgctt
901 catctataac cgagtggtct tggagcatga ggaggtccgg gcaggtgctg tgagtgctct
961 ggcgaagttt ggagcccaga atgaagagat gttacccagt atcttggtgt tgctgaagag
1021 gtgtgtgatg gatgatgaca atgaagtaag ggaccgagcc accttctacc taaatgtcct
1081 ggagcagaag cagaaggccc ttaatgcagg ctatatccta aatggtctga ctgtgtccat
1141 ccctggtctg gagagggctc tgcagcagta cactctagaa ccatcagaaa aaccttttga
1201 cctcaagtct gtgcccctgg ccacggcgcc catggcagag cagagaacag aaagtacccc
1261 catcacagca gtcaaacagc ctgagaaagt ggcagctacc aggcaggaga tcttccagga
1321 gcagttggca gcagtgccag agttccgcgg tcttgggccc ctcttcaagt cctcgcctga
1381 gcccgtggcc ctcaccgagt cagagacgga gtatgtcatc cgctgcacca aacacacctt
1441 caccaaccac atggtttttc agtttgactg cacaaacaca ctcaatgacc agaccttgga
1501 gaatgtcaca gtgcagatgg agcccactga ggcctatgag gtgctctgtt acgtgcctgc
1561 ccggagcctg ccctacaacc agcccgggac ctgctacaca ctggtggcac tgcccaaaga
1621 agaccccaca gctgtggcct gcacattcag ctgcatgatg aagttcactg tcaaggactg
1681 tgatcccacc actggggaga ctgatgacga aggctatgag gatgagtatg tgctggaaga
1741 tctggaagtt actgtagctg atcacattca aaaggtcatg aaactgaact tcgaagcagc
1801 ctgggatgag gtaggggatg aatttgagaa ggaggaaacg ttcaccttgt ctaccatcaa
1861 gacacttgaa gaggctgtgg gtaatattgt gaagttcttg ggaatgcacc cttgtgagag
1921 gtcagacaaa gtgccggata acaagaacac ccacacgttg ctcctggctg gtgtgttccg
1981 gggtggtcat gacatcctgg tgcgctcccg gctgctgctt ttggacacag tgacaatgca
2041 ggtgacagcc agaagtttgg aggagctgcc agtagacatc atcttggcat ctgtgggata
2101 agaggccagc ctgcatagga cctcataccc ttccccaaca ctacctggaa gttgtgcctt
2161 cctcatgaaa ctggcagaaa ccccttccca agcttctgta ttgaaaaaca attaggaatc
2221 attgcagatt tttttttatt ctgctcccac ctcccacccg ggactacttg ctggtgactt
2281 tttttttttt ttttttttaa ataggggatg attttagctt gtcctaaatc ttgctgtcca
2341 cccttccagg aaagggacat tgtaaatgaa taaaacattc tcaactcctc ttgaatctat
2401 cccccaagaa accatcttat ccctgtaata aatcagcatg tatttattga aaaaaaaaaa
2461 aaaaaaaaaa aa
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