LOCUS BC020338 1000 bp mRNA linear HTC 16-FEB-2007 DEFINITION Homo sapiens protocadherin 7, mRNA (cDNA clone IMAGE:4156665). ACCESSION BC020338 VERSION BC020338.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1000) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1000) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: e Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14589930 This clone has the following problem: no polyA-tail. FEATURES Location/Qualifiers source 1..1000 /db_xref="H-InvDB:HIT000050738" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4156665" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 173 a 296 c 346 g 185 t ORIGIN 1 ggctgctgcg gtttcaggcg gctgcttcgt gactaatgac cttgcgcaga gttgttaaga 61 aaaaagagaa acccgcgctc tccggggtga gaagggactg actctgggcg tctctgaaga 121 tggctcgggc ttctctttgg cgcgccgggg ggaccctgac actgaccgct ctgtgacgcg 181 agtagtctcc cctgcaccgt gcccgaagcg acgtgccggg ggatttttca ttctcgatct 241 gttgactggc tcccccgctg catgagcaga gtcggagttg agactggctt gttgctggcc 301 ccagcgcctg gtgcaggaag cgactcacgt ttgtctgggt ggccggagcc ggagcagagc 361 ctgggtttgg agtgagtgcc tggaacgtga attggactca actcgagtag cagcaaagac 421 cagcgggctg gcaggcgggg gaggctgcag gctcattccc cacctcttcc cagccccact 481 gcccgtctgc cggagcggtt ctggcccctt ccgacagagc ggggactaga gccggggatt 541 ctccgcccgc tgaggggatg actctgggtt gggggagcgc cgaacccgcg gcgcgcagtg 601 tcccgtgaac tgtgagtact gcgactgaac ggcggcaggc gagcgggcga ttagcaccca 661 ttgcatgaat tatgaaacaa taactttcgg aagaagcagg aggaaaaaaa gaagcatcta 721 tcgctgccct cccaccccca ttcccggcca actctccacg ccgcttttgc cccctccctc 781 ccctccctct cgctccttcc tttccgggag aggggagagg actcggggga gggcaggcgg 841 ccggccccgg aggagggggg cgccgagggg gctgtggtta gaaggagcag tagcagcagc 901 agcaggagaa gatgctgagg atgcggaccg cgggatgggc gcgcggctgg tgcttgggct 961 gctgcctcct cctgccgctc tcgctcagcc tggcggccgc //