LOCUS BC020279 1747 bp mRNA linear HTC 09-JUN-2008 DEFINITION Homo sapiens shisa homolog 5 (Xenopus laevis), mRNA (cDNA clone IMAGE:4914863). ACCESSION BC020279 VERSION BC020279.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1747) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1747) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC020279.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: m Column: 17 This clone has the following problem: no 5' EST match. FEATURES Location/Qualifiers source 1..1747 /db_xref="H-InvDB:HIT000090061" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4914863" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 338 a 527 c 473 g 409 t ORIGIN 1 ggaaattgaa actgagtggc ccacgatggg aagaggggaa agcccagggg tacaggaggc 61 ctctgggtga aggcagaggc taacatgggg ttcggagcga ccttggccgt tggcctgacc 121 atctttgtgc tgtctgtcgt cactatcatc atctgcttca cctgctcctg ctgctgcctt 181 tacaagacgt gccgccgacc acgtccggtt gtcaccacca ccacatccac cactgtggtg 241 catgcccctt atcctcagcc tccaagtgtg ccgcccagct accctggacc aagctaccag 301 ggctaccaca ccatgccgcc tcagccaggg atgccagcag caccctaccc aatgcagtac 361 ccaccacctt acccagccca gcccatgggc ccaccggcct accacgagac cctggctgga 421 ggagcagccg cgccctaccc cgccagccag cctccttaca acccggccta catggatgcc 481 ccgaaggcgg ccctctgagc attccctggc ctctctggct gccacttggt tatgttgtgt 541 gtgtgcgtga gtggtgtgca ggcgcggttc cttacgcccc atgtgtgctg tgtgtgtcca 601 ggcacggttc cttacgcccc atgtgtgctg tgtgtgtcct gcctgtatat gtggcttcct 661 ctgatgctga caaggtgggg aacaatcctt gccagagtgg gctgggacca gactttgttc 721 tcttcctcac ctgaaattat gcttcctaaa atctcaagcc aaactcaaag aatggggtgg 781 tggggggcac cctgtgaggt ggcccctgag aggtgggggc ctctccaggg cacatctgga 841 gttcttctcc agcttaccct agggtgacca agtagggcct gtcacaccag ggtggcgcag 901 ctttctgtgt gatgcagatg tgtcctggtt tcggcagcgt agccagctgc tgcttgaggc 961 catggctcgt ccccggagtt gggggtaccc gttgcagagc cagggacatg atgcaggcga 1021 agcttgggat ctggccaagt tggactttga tcctttgggc agatgtccca ttgctccctg 1081 gagcctgtca tgcctgttgg ggatcaggca gcctcctgat gccagaacac ctcaggcaga 1141 gccctactca gctgtacctg tctgcctgga ctgtcccctg tccccgcatc tcccctggga 1201 ccagctggag ggccacatgc acacacagcc tagctgcccc cagggagctc tgctgccctt 1261 gctggccctg cccttcccac aggtgagcag ggctcctgtc caccagcaca ctcagttctc 1321 ttccctgcag tgttttcatt ttattttagc caaacatttt gcctgttttc tgtttcaaac 1381 atgatagttg atatgagact gaaacccctg ggttgtggag ggaaattggc tcagagatgg 1441 acaacctggc aactgtgagt ccctgcttcc cgacaccagc ctcatggaat atgcaacaac 1501 tcctgtaccc cagtccacgg tgttctggca gcagggacac ctgggccaat gggccatctg 1561 gaccaaaggt ggggtgtggg gccctggatg gcagctctgg cccagacatg aatacctcgt 1621 gttcctcctc cctctattac tgtttcacca gagctgtctt agctcaaatc tgttgtgttt 1681 ctgagtctag ggtctgtaca cttgtttata ataaatgcaa tcgtttggaa aaaaaaaaaa 1741 aaaaaaa //