LOCUS BC020262 2762 bp mRNA linear HTC 17-NOV-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 54, mRNA (cDNA clone
IMAGE:4877579), with apparent retained intron.
ACCESSION BC020262
VERSION BC020262.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2762)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2762)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2762
/db_xref="H-InvDB:HIT000090053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4877579"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 569 a 898 c 677 g 618 t
ORIGIN
1 cccagattct ggaactcagc tcttaaacct ttaaaatctc catccctgag accgttctcc
61 gttggaggat ccttccctcc ccgctttctg aacctctcaa cacctcctgt agaccccaaa
121 atgacttctc catgctctcc tcccctaaaa ccaccaattt ctcctccaaa aacccctgta
181 ccccaagcca gcagcattcc atctcctcct ctacccccaa gtcccctgga cttttcagct
241 ttaccatccc ctccctggag tcagcagacc cctgttcccc caccgctccc actgcctcct
301 ccacccgctg ccacagggcc tgctccccct catgtcttcg gcctggagaa gagccagctc
361 ctgaaggagg cctttgataa ggccggcccg gtccccaagg gcagagaaga tgtgaagagg
421 cttctgaaac tacacaagga ccggttccga ggtgacctgc ggtggatcct cttctgtgca
481 gacctgccgt ccctcatcca agaaggccct caatgcgggc tggtggcctt gtggatggca
541 ggtactctcc tgtcgccccc cagtggcgtc cccctggaga gactcatacg ggtggccacg
601 gaaagaggct acacggccca gggagagatg ttctcagtgg ccgatatggg caggctggcc
661 caggaggtgc tgggctgcca ggccaagctg ctctctggtg gcctgggcgg tcccaacaga
721 gacctcgtcc tgcagcacct ggtcactgga catcccctgc tcatccccta cgacgaggac
781 ttcaaccatg agccgtgtca gaggaagggc cacaaggcac actgggcggt gagtgcaggg
841 gtcctgctgg gtgttcgggc tgtgcccagt ctcggctaca ctgaggaccc tgagctgccg
901 ggcctgttcc acccagtgct gggcacgccc tgccaaccac catccctgcc agaggagggc
961 tccccgggag ctgtctacct gctgtccaag cagggcaaga gttggcacta tcagctgtgg
1021 gactacgacc aggtccggga gagcaacctg cagctgacgg acttctcgcc ctcacgggcc
1081 actgacggcc gggtgtacgt ggtgcccgtg ggtggggtac gggctggcct ctgtggccag
1141 gccctgctcc tcacaccaca ggactgcagc cattagctgc ggctgcggtc tcaggctgca
1201 gcctagctcg gtaaccattt gaagtgtgcc tacacttctc ccactgtgtg atggcgacaa
1261 gattgaagct aggtctcagg ggtctccagt cctccttcat cagggccacc ccctgcagta
1321 ttgagcacca gctggtccct ctagggagag attgacaaca gcccggaccc tgcggcctgc
1381 ctattccatc tgaatgtcgc atcgtctgtt tctcactagg ggccgcctct gtcatctcac
1441 tagacatttg aggaacctcc tgcctgggcc ctctgcttct cacaggacag ggacactgaa
1501 ctgcgtcagc ctcagctcac ccctccttag cccaaggtct tcctcatgct tgccacctac
1561 tagtcatact ggccttttag atccctgaag tgttgttcaa atccccggat cattgagtcc
1621 cacccccagc cctctgctgc ggatcactcc ttaacttttc cattggggct caggtatcac
1681 tacctcaggg aagagtcctg cagccccagt caagacaccc ctcccccacc tcatgtcttc
1741 acagttttaa agcccatctg ggagcagtta cctgtgccag cccctctacc tgtgttagca
1801 gatctggcaa ccctgtaagg ggggtgctag atggacccga tttgacagat ggcaagactg
1861 aggcctggag aagtggaatc actggcctga ggtcacatga ctagcacatg gcaaggtcag
1921 gattcaagct aggtagtcag tatctcagcc aggctgtctc ctggctccct gaacattatg
1981 gtgctgacca caaactttcc tgtccactta tacaaacttc tagtgagtgt gtgtgattac
2041 tagcttcatg aatacctgac ccctccactc tgaaggagga acaggcctgt ctggatcact
2101 tctctgtccc taactgagcc catctcattt agggaaacta cagagcactg ttgctttttt
2161 ttttagatgg agtctcgttc tgtcgtccag gctggagtgc ggtggcgtga tctcagctca
2221 ctccagcctc cacttcccag gttcaagtga ttctcctgcc tcagcccccc aagtaactgg
2281 gattacaggc atgcaccacc atgcctggct aattttttgt atttttagta gagacggggc
2341 tttgccatgt tggccaggct ggtctcgaac tcctgacctt gagtaatcca cccgccccgg
2401 cctcccaaag tgctgggatt acaggtgtga gccactgagc ccggccacag tgcagtattt
2461 ctaaccagtg atcagggtaa agaggatgcg tgtccaccat cccagccctg atcagcctgt
2521 ctgtgcatcc cccatcccag ccagggcttg gagcagcctt gctcaccact gtgtcccctg
2581 cattgtaaca catccaggca caagaatagc cgcccagtga ctgccaagtg agtgaaccag
2641 cctgcttgga gcctgcctct ttcccaaact gctcattatc ctgttacccc acccagccca
2701 cgtgtccaaa tacactccag atgcaaaata aaaagctcta cgacaaaaaa aaaaaaaaaa
2761 aa
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