LOCUS BC020233 903 bp mRNA linear HUM 19-NOV-2003
DEFINITION Homo sapiens cDNA clone MGC:31936 IMAGE:4765518, complete cds.
ACCESSION BC020233
VERSION BC020233.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 903)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 903)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: h Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..903
/db_xref="H-InvDB:HIT000038770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31936 IMAGE:4765518"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS 35..748
/codon_start=1
/product="Unknown (protein for MGC:31936)"
/protein_id="AAH20233.1"
/translation="MAWSPLLLTLLAHCTGSWAQSVLTQPPSVSGAPGQRVTISCTGS
SSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAE
DEADYYCQSYDSSLSGFVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCL
ISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSC
QVTHEGSTVEKTVAPTECS"
misc_feature 119..427
/note="IGv; Region: Immunoglobulin domain variable region
(v) subfamily"
/db_xref="CDD:cd00099"
misc_feature 443..727
/note="IGc; Region: Immunoglobulin domain constant region
subfamily"
/db_xref="CDD:cd00098"
BASE COUNT 216 a 293 c 227 g 167 t
ORIGIN
1 ggcataagag gcagcactca ggacaatctc cagcatggcc tggtctcctc tcctcctcac
61 tctcctcgct cactgcacag ggtcctgggc ccagtctgtg ctgacgcagc cgccctcagt
121 gtctggggcc ccagggcaga gggtcaccat ctcctgcact gggagcagct ccaacatcgg
181 ggcaggttat gatgtacact ggtaccagca gcttccagga acagccccca aactcctcat
241 ctatggtaac agcaatcggc cctcaggggt ccctgaccga ttctctggct ccaagtctgg
301 cacctcagcc tccctggcca tcactgggct ccaggctgag gatgaggctg attattactg
361 ccagtcctat gacagcagcc tgagtggttt tgtggtattc ggcggaggga ccaagctgac
421 cgtcctaggt cagcccaagg ctgccccctc ggtcactctg ttcccgccct cctctgagga
481 gcttcaagcc aacaaggcca cactggtgtg tctcataagt gacttctacc cgggagccgt
541 gacagtggcc tggaaggcag atagcagccc cgtcaaggcg ggagtggaga ccaccacacc
601 ctccaaacaa agcaacaaca agtacgcggc cagcagctat ctgagcctga cgcctgagca
661 gtggaagtcc cacagaagct acagctgcca ggtcacgcat gaagggagca ccgtggagaa
721 gacagtggcc cctacagaat gttcataggt tctcaaccct caccccccac cacgggagac
781 tagagctgca ggatcccagg ggaggggtct ctcctcccac cccaaggcat caagcccttc
841 tccctgcact caataaaccc tcaataaata ttctcattgt caatcaaaaa aaaaaaaaaa
901 aaa
//