LOCUS BC020231 1146 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens Rho-related BTB domain containing 3, mRNA (cDNA clone
IMAGE:4905926), partial cds.
ACCESSION BC020231
VERSION BC020231.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1146)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1146)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281538.
FEATURES Location/Qualifiers
source 1..1146
/db_xref="H-InvDB:HIT000090036"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4905926"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1146
/gene="RHOBTB3"
/db_xref="GeneID:22836"
/db_xref="HGNC:HGNC:18757"
/db_xref="MIM:607353"
CDS 507..>1146
/gene="RHOBTB3"
/codon_start=1
/product="RHOBTB3 protein"
/protein_id="AAH20231.1"
/db_xref="GeneID:22836"
/db_xref="HGNC:HGNC:18757"
/db_xref="MIM:607353"
/translation="MSIHIVALGNEGDTFHQDNRPSGLIRTYLGRSPLVSGDESSLLL
NAASTVARPVFTEYQASAFGNVKLVVHDCPVWDIFDSDWYTSRNLIGGADIIVIKYNV
NDKFSFHEVKDNYIPVIKRALNSVPVIIAAVGTRQNEELPCTCPLCTSDRGSCVSTTE
GIQLAKELGATYLELHSLDDFYIGKYFGGVLEYFMIQALNQKTSEKMKKKKKK"
BASE COUNT 244 a 326 c 354 g 222 t
ORIGIN
1 gccaccggag ctcccggggc ctccgcgggg agcgcgtccc ccgcatccgc ccgacccccg
61 gggctggcac gtgctgcgcc cggtccgctg agggggcgga ggccccgatc tccccgaccc
121 cccttctctg cttagaggag gaggagcagc ggcagcggca gcaggaggcg acagctgcca
181 gccgaggagg cgcggcggag aggggactgc ggtcagctgc gtccacttgg ggctgtgcgg
241 cggtcccgcg cccggcgatg ttcccgggca ctccctgagt agcggcagct tatcccccgc
301 ccgctagccc gccctggtcc ccggctcgct cgctggctgg cgcggccccg gccccgctct
361 gcgtcggccc cgccgcggtg gaggcgcgcg agggggacgc ggccggggat gagcggattg
421 cgggtgaact cgccgcccgg gggccccgcg aagccgtgag ccgctgcttt tctccgagtc
481 gccgccctgc ccttggattt gagatcatgt ccatccacat cgtggcgctg gggaacgagg
541 gggacacatt ccaccaggac aaccggccgt cggggcttat ccgcacttac ctggggagaa
601 gccctctggt ctccggggac gagagcagct tgttgctgaa cgcggccagc acggtcgcgc
661 gtccggtgtt caccgagtat caggccagtg cgtttgggaa tgtcaagctg gtggtccacg
721 actgtcccgt ctgggacata tttgacagtg attggtacac ttctcgaaat ctaattgggg
781 gcgctgacat cattgtgatc aaatacaacg ttaatgacaa gttttcattc catgaagtaa
841 aggataatta tattccagtg ataaaaagag cattaaattc agttccagta attattgctg
901 ctgttggtac cagacaaaat gaagagttac cttgtacatg cccactatgt acctcagaca
961 gagggagctg tgttagtaca actgaaggga tccaacttgc aaaagaacta ggagcgacct
1021 atcttgaact ccacagcctt gatgacttct acataggaaa gtattttgga ggagtgttgg
1081 agtattttat gattcaagcc ttaaatcaga agacaagtga aaaaatgaaa aaaaaaaaaa
1141 aaaaaa
//