LOCUS BC020218 2168 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase, very long chain, mRNA (cDNA clone MGC:31908 IMAGE:5090104), complete cds. ACCESSION BC020218 VERSION BC020218.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2168) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2168) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557234. FEATURES Location/Qualifiers source 1..2168 /db_xref="H-InvDB:HIT000038759" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:31908 IMAGE:5090104" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2168 /gene="ACADVL" /gene_synonym="ACAD6" /gene_synonym="LCACD" /gene_synonym="VLCAD" /db_xref="GeneID:37" /db_xref="HGNC:HGNC:92" /db_xref="MIM:609575" CDS 63..1964 /gene="ACADVL" /gene_synonym="ACAD6" /gene_synonym="LCACD" /gene_synonym="VLCAD" /codon_start=1 /product="acyl-Coenzyme A dehydrogenase, very long chain" /protein_id="AAH20218.1" /db_xref="GeneID:37" /db_xref="HGNC:HGNC:92" /db_xref="MIM:609575" /translation="MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGA AQESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDA LEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQ SIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEK KMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGII AKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIE AAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFV ALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELS RSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRS LSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGG VVTSNPLGF" BASE COUNT 497 a 557 c 677 g 437 t ORIGIN 1 ggcgtgcagg acgccagagc tgggtcagag ctcgagccag cggcgcccgg agagattcgg 61 agatgcaggc ggctcggatg gccgcgagct tggggcggca gctgctgagg ctcgggggcg 121 gaagctcgcg gctcacggcg ctcctggggc agccccggcc cggccctgcc cggcggccct 181 atgccggggg tgccgctcag gaatctaagt cctttgctgt gggaatgttc aaaggccagc 241 tcaccacaga tcaggtgttc ccatacccgt ccgtgctcaa cgaagagcag acacagtttc 301 ttaaagagct ggtggagcct gtgtcccgtt tcttcgagga agtgaacgat cccgccaaga 361 atgacgctct ggagatggtg gaggagacca cttggcaggg cctcaaggag ctgggggcct 421 ttggtctgca agtgcccagt gagctgggtg gtgtgggcct ttgcaacacc cagtacgccc 481 gtttggtgga gatcgtgggc atgcatgacc ttggcgtggg cattaccctg ggggcccatc 541 agagcatcgg tttcaaaggc atcctgctct ttggcacaaa ggcccagaaa gaaaaatacc 601 tccccaagct ggcatctggg gagactgtgg ccgctttctg tctaaccgag ccctcaagcg 661 ggtcagatgc agcctccatc cgaacctctg ctgtgcccag cccctgtgga aaatactata 721 ccctcaatgg aagcaagctt tggatcagta atgggggcct agcagacatc ttcacggtct 781 ttgccaagac accagttaca gatccagcca caggagccgt gaaggagaag atcacagctt 841 ttgtggtgga gaggggcttc gggggcatta cccatgggcc ccctgagaag aagatgggca 901 tcaaggcttc aaacacagca gaggtgttct ttgatggagt acgggtgcca tcggagaacg 961 tgctgggtga ggttgggagt ggcttcaagg ttgccatgca catcctcaac aatggaaggt 1021 ttggcatggc tgcggccctg gcaggtacca tgagaggcat cattgctaag gcggtagatc 1081 atgccactaa tcgtacccag tttggggaga aaattcacaa ctttgggctg atccaggaga 1141 agctggcacg gatggttatg ctgcagtatg taactgagtc catggcttac atggtgagtg 1201 ctaacatgga ccagggagcc acggacttcc agatagaggc cgccatcagc aaaatctttg 1261 gctcggaggc agcctggaag gtgacagatg aatgcatcca aatcatgggg ggtatgggct 1321 tcatgaagga acctggagta gagcgtgtgc tccgagatct tcgcatcttc cggatctttg 1381 aggggacaaa tgacattctt cggctgtttg tggctctgca gggctgtatg gacaaaggaa 1441 aggagctctc tgggcttggc agtgctctaa agaatccctt tgggaatgct ggcctcctgc 1501 taggagaggc aggcaaacag ctgaggcggc gggcagggct gggcagcggc ctgagtctca 1561 gcggacttgt ccacccggag ttgagtcgga gtggcgagct ggcagtacgg gctctggagc 1621 agtttgccac tgtggtggag gccaagctga taaaacacaa gaaggggatt gtcaatgaac 1681 agtttctgct gcagcggctg gcagacgggg ccatcgacct ctatgccatg gtggtggttc 1741 tctcgagggc ctcaagatcc ctgagtgagg gccaccccac ggcccagcat gagaaaatgc 1801 tctgtgacac ctggtgtatc gaggctgcag ctcggatccg agagggcatg gccgccctgc 1861 agtctgaccc ctggcagcaa gagctctacc gcaacttcaa aagcatctcc aaggccttgg 1921 tggagcgggg tggtgtggtc accagcaacc cacttggctt ctgaatactc ccggccaggg 1981 cctgtcccag ttatgtgcct tccctcaagc caaagccgaa gcccctttcc ttaaggccct 2041 ggtttgtccc gaaggggcct agtgttccca gcactgtgcc tgctctcaag agcacttact 2101 gcctcgcaaa taataaaaat ttctagccag taaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2161 aaaaaaaa //