LOCUS BC020116 2921 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens TRM2 tRNA methyltransferase 2 homolog B (S.
cerevisiae), mRNA (cDNA clone MGC:16875 IMAGE:4342798), complete
cds.
ACCESSION BC020116
VERSION BC020116.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2921)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2921)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255252.
FEATURES Location/Qualifiers
source 1..2921
/db_xref="H-InvDB:HIT000038735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16875 IMAGE:4342798"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2921
/gene="TRMT2B"
/gene_synonym="dJ341D10.3"
/db_xref="GeneID:79979"
/db_xref="HGNC:HGNC:25748"
CDS 368..1882
/gene="TRMT2B"
/gene_synonym="dJ341D10.3"
/codon_start=1
/product="TRMT2B protein"
/protein_id="AAH20116.1"
/db_xref="GeneID:79979"
/db_xref="HGNC:HGNC:25748"
/translation="MAGLKRRVPLHSLRYFISMVGLFSKPGLLPWYARNPPGWSQLFL
GTVCKGDFTRVIATKCQKGQKSQKKPSHLGPLDGSWQERLADVVTPLWRLSYEEQLKV
KFAAQKKILQRLESYIQMLNGVSVTTAVPKSERLSCLLHPIIPSPVINGYRNKSTFSV
NRGPDGNPKTVGFYLGTWRDGNVVCVQSNHLKNIPEKHSQVAQYYEVFLRQSPLEPCL
VFHEGGYWRELTVRTNSQGHTMAIITFHPQKLSQEELHVQKEIVKEFFIRGPGAACGL
TSLYFQESTMTRCSHQQSPYQLLFGEPYIFEELLSLKIRISPDAFFQINTAGAEMLYR
TVGELTGVNSDTILLDICCGTGVIGLSLAQHTSRVLGIELLEQAVEDARWTAAFNGIT
NSEFHTGQAEKILPGLLKSKEDGQSIVAVVNPARAGLHYKVIQAIRNFRAIHTLVFVS
CKLHGESTRNVIELCCPPDPAKKLLGEPFVLQQAVPVDLFPHTPHCELVLLFTR"
BASE COUNT 692 a 707 c 754 g 768 t
ORIGIN
1 gctatgagtg cttttaagga aggtctccat agaaggttcc cccagcaaag tagggggggg
61 tactccccga gaggagtcga ggtgccggag cctgctgcct cgccgacgct gggaggagcc
121 ccgtgtcccg ccgcgcttgc caagggttgg ctgcgcgtgc ggcgggagta gaggcgcctt
181 gcgcaccagg aagtgactgt ttccccgccg cagcaaacca ggccatccgc tggcctttta
241 gtttgccgcc tcagaaaact ccctactatg ccaaactgtc cgcggggcgg ggaatggagg
301 aggcaggcgg ggctggagac gggacccgac ggtgactgcg caaggtggat ttcagtgtgt
361 tctttggatg gcaggcctta agagaagagt cccactgcac agcctcagat acttcatctc
421 catggtgggt ctcttctcca aaccaggact gcttccctgg tatgccagaa atccaccagg
481 atggtcacag ctctttctgg gcacagtatg taagggagat ttcacccgtg tgatagccac
541 gaaatgtcag aaaggacaaa aaagtcagaa gaaaccaagc catcttggac cactagatgg
601 ttcctggcag gaaaggctgg ctgatgttgt gacaccactc tggaggttga gctatgaaga
661 acagctcaag gtgaaatttg cagctcagaa gaaaatttta caaagactag agtcttacat
721 ccaaatgctc aatggagtca gtgtgacaac ggctgtaccc aaatctgaga ggctctcttg
781 tcttctccat cctattatac cctctcctgt catcaatggt taccgaaata agtccacctt
841 ctctgtgaac cgaggtccag atggcaatcc aaagactgtg gggttctacc tgggaacttg
901 gagagatggg aacgttgtct gtgtgcagtc taatcatctg aaaaacatcc ctgagaaaca
961 cagtcaagtg gcgcagtact atgaagtatt ccttcgacag tctccattgg agccctgcct
1021 tgtatttcat gaaggtggat actggcgtga gctcacagtc cgcaccaata gccaagggca
1081 cacaatggct atcatcactt tccatcccca gaaattaagt caggaggagc tccatgttca
1141 gaaggagatt gtaaaggaat ttttcatcag aggtcctgga gcagcctgtg gcttgacctc
1201 actttacttc caggaaagta ccatgacccg ttgcagccat cagcagtctc cctatcagct
1261 tctgtttggg gaaccctaca tctttgaaga acttctgagc ttgaagatcc gcatctctcc
1321 agatgccttt ttccagatta acacagctgg tgcagagatg ctgtatcgga ctgtggggga
1381 gctgactgga gtgaactctg acaccatcct tcttgacatc tgctgtggaa ctggtgtgat
1441 tggcctctct ctggctcagc atacatctcg ggtccttggg attgaattgt tggagcaggc
1501 agtggaggat gcaagatgga ctgcagcctt caatggcatc accaactctg aatttcatac
1561 tggtcaagca gagaagattt tgccagggct gctaaagtca aaggaagatg gacagtcaat
1621 tgttgctgtg gtgaacccag cccgtgccgg actgcattac aaggtgattc aagccattcg
1681 aaacttcagg gccatccaca cgctagtttt tgtttcctgc aagctccatg gtgaatccac
1741 taggaatgtc attgagctgt gctgtcctcc agaccctgct aagaagctct taggcgagcc
1801 ctttgtcctg cagcaagctg tacctgtgga tttgttccct cacaccccac attgtgagct
1861 ggtgctcctc tttactcgat aagcagcctc ctagaagact gcaggctatt tgttaaggct
1921 gaagtttcag aaactttcag gtttggcata ttgctacatt gcagaccctg ggagcattac
1981 agtggaaacc aatctttggt ttgtgaatag gaagaatcta ttaggcctct ggtctgaggc
2041 agattttttt tttgagatag agtctcactc ttgcccaggc tggggtgtcg tggcgtgatc
2101 tcagctcact gcaacctccg cctcccgggt tcaagtgatt ctcgtgcctc agcttcccca
2161 gtagctagga ttaaaggtgc gtgccaccat gcccggctaa tttttgtatt tttggtagag
2221 acagggtttc accatgttag ccaggctggt ctcaaactcc tgacctcaag tgatccaccc
2281 gcctcggcct ctcaaagtgc tgggattata ggcgtgagcc accacacccc gccgcggctg
2341 acttaacctt agatttcaga ttccctttca atcatgcccg tttgcttggg tttgaccact
2401 ccccactcct ggatctggac tgtttcttcc tgttgctgtc agccttggtt ctagtttata
2461 gtcttgtctc ctccgtttct gcttatggtg tggacaaatg acctttttta agcagctggt
2521 aataatttta cattgactgg agcctgtgca tttgctcaga gatgctacaa tttttagata
2581 tttctaagac ttctggattc ttgaggtagt taaggattaa aaccagaaac agtcgaggtt
2641 ttttaaaagc agggtaagcc atgaagtgaa tacagggtga ctgagtgatc atcagatgag
2701 attaattctt ttgggttttc ttggttttaa ggcatctcga atgccccttg aaaatgtagt
2761 tttccctggt ggtgggcacc tgtaatccca gctactcggg aggctgaggc aggataattg
2821 cttggacctg ggaggtggag gttgcagtga gctgaggttg tgccactgca ctccagcctg
2881 ggtgacagag tgagacacca tctcaaaaaa aaaaaaaaaa a
//