LOCUS BC020044 1339 bp mRNA linear ROD 16-SEP-2003
DEFINITION Mus musculus WD repeat domain 26, mRNA (cDNA clone IMAGE:4018743),
partial cds.
ACCESSION BC020044
VERSION BC020044.1
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1339)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1339)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Gilbert Smith, Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 36 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21704011.
FEATURES Location/Qualifiers
source 1..1339
/organism="Mus musculus"
/mol_type="mRNA"
/strain="Czech II"
/db_xref="taxon:10090"
/clone="IMAGE:4018743"
/tissue_type="Mammary tumor metastatized to lung. Tumor
arose spontaneously from a senescent normal mammary
(clonal) outgrowth infected with the virus MMTV."
/clone_lib="NCI_CGAP_Lu29"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1339
/gene="Wdr26"
/db_xref="GeneID:226757"
/db_xref="MGI:MGI:1923825"
CDS <1..1212
/gene="Wdr26"
/codon_start=1
/product="Wdr26 protein"
/protein_id="AAH20044.2"
/db_xref="GeneID:226757"
/db_xref="MGI:MGI:1923825"
/translation="CSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQ
TLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWF
CKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVA
CGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLD
GNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFEDLTDRNIVQEDHPIMSFTI
SKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSED
HKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQ
NIEEECSSMDS"
misc_feature 262..1149
/gene="Wdr26"
/note="COG2319; Region: FOG: WD40 repeat [General function
prediction only]"
/db_xref="CDD:COG2319"
BASE COUNT 395 a 271 c 334 g 339 t
ORIGIN
1 tgcagccatg ccgaagacct acgggcaaaa gctgaatggg aaggcaaggg cacagcgtcc
61 cggtccaaac tgctggacaa gcttcagacc tatttaccac catcagtgat gcttccccca
121 cggcgtttac agactctcct gcggcaggcg gtggaactac aaagggatcg gtgcctatat
181 cacaatacca aacttgacaa taatctagat tctgtgtctc tacttataga tcatgtttgt
241 agtaggaggc agtttccctg ttacactcaa cagatactta cagagcattg taatgaagtg
301 tggttctgta aattttctaa tgatggcact aaactagcaa caggatcaaa ggataccaca
361 gttatcatat ggcaagttga tccggatacg cacctgttaa aactgcttaa aacgttagaa
421 ggacatgcgt atggtgtctc ttatatagca tggagtccag atgacagcta tcttgttgct
481 tgtggtccag atgactgctc tgagctttgg ctttggaatg tacagacggg agaattaaga
541 acaaaaatga gccaatctca tgaagacagt ttgaccagtg tggcctggaa tccagatggg
601 aaacgctttg tgacgggagg tcagcgtggt cagttctacc agtgtgacct ggacggaaat
661 cttctggact cctgggaagg agtgcgagta cagtgcctgt ggtgcttgag tgacgggaag
721 actgtgctgg cttccgacac gcaccagaga gtccggggct acaactttga ggacctgaca
781 gatagaaaca tagtacagga agatcatcct attatgtcat ttactatttc caaaaatggc
841 cgattagctt tgttaaatgt agcaactcag ggagttcatt tatgggactt gcaagacaga
901 gttttagtaa ggaaatatca aggtgttacc caagggtttt atacaatcca ctcgtgtttt
961 ggaggccata atgaagactt cattgctagt ggcagcgaag atcacaaggt ttacatctgg
1021 cacaaacgta gtgaactgcc aattgcggag ctcacagggc acacgcgcac agtaaattgt
1081 gttagctgga acccacagat tccatccatg atggccagtg cctcagacga tggcactgtt
1141 agaatatggg gaccagcacc tttcatagac caccagaata ttgaagagga atgcagtagc
1201 atggatagtt gatggcaaat ttggagcaga cgacttctgt ttaacttaaa attagtcgta
1261 ttttaatggc ttgggatttg gtgcaaacaa acatgattga tagctggaca gacatgctcg
1321 tcatgaaaaa aaaaaaaaa
//