LOCUS BC019884 1379 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane protein 41A, mRNA (cDNA clone MGC:29941
IMAGE:4991416), complete cds.
ACCESSION BC019884
VERSION BC019884.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1379)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1379)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147477.
FEATURES Location/Qualifiers
source 1..1379
/db_xref="H-InvDB:HIT000038704"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29941 IMAGE:4991416"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1379
/gene="TMEM41A"
/gene_synonym="2900010K02Rik"
/gene_synonym="MGC15397"
/db_xref="GeneID:90407"
/db_xref="HGNC:HGNC:30544"
CDS 44..838
/gene="TMEM41A"
/gene_synonym="2900010K02Rik"
/gene_synonym="MGC15397"
/codon_start=1
/product="transmembrane protein 41A"
/protein_id="AAH19884.1"
/db_xref="GeneID:90407"
/db_xref="HGNC:HGNC:30544"
/translation="MRPLLGLLLVFAGCTFALYLLSTRLPRGRRLGSTEEAGGRSLWF
PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPW
LGLLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKVEENRNSLFFFLLFL
RLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFS
WDTVFKLLAIAMVALIPGTLIKKFSQKHLQLNETSTANHIHSRKDT"
BASE COUNT 298 a 356 c 353 g 372 t
ORIGIN
1 gtgagcttct cggctgcccc gcgggccggg gtgcggagcc gacatgcgcc cgcttctcgg
61 cctccttctg gtcttcgccg gctgcacctt cgccttgtac ttgctgtcga cgcgactgcc
121 ccgcgggcgg agactgggct ccaccgagga ggctggaggc aggtcgctgt ggttcccctc
181 cgacctggca gagctgcggg agctctctga ggtccttcga gagtaccgga aggagcacca
241 ggcctacgtg ttcctgctct tctgcggcgc ctacctctac aaacagggct ttgccatccc
301 cggctccagc ttcctgaatg ttttagctgg tgccttgttt gggccatggc tggggcttct
361 gctgtgctgt gtgttgacct cggtgggtgc cacatgctgc tacctgctct ccagtatttt
421 tggcaaacag ttggtggtgt cctactttcc tgataaagtg gccctgctgc agagaaaggt
481 ggaggagaac agaaacagct tgtttttttt cttattgttt ttgagacttt tccccatgac
541 accaaactgg ttcttgaacc tctcggcccc aattctgaac attcccatcg tgcagttctt
601 cttctcagtt cttatcggtt tgatcccata taatttcatc tgtgtgcaga cagggtccat
661 cctgtcaacc ctaacctctc tggatgctct tttctcctgg gacactgtct ttaagctgtt
721 ggccattgcc atggtggcat taattcctgg aaccctcatt aaaaaattta gtcagaaaca
781 tctgcaattg aatgaaacaa gtactgctaa tcatatacac agtagaaaag acacatgatc
841 tggattttct gtttgccaca tccctggact cagttgctta tttgtgtaat ggatgtggtc
901 ctctaaagcc cctcattgtt tttgattgcc ttctataggt gatgtggaca ctgtgcatca
961 atgtgcagtg tcttttcaga aaggacactc tgctcttgaa ggtgtattac atcaggtttt
1021 caaaccagcc ctggtgtagc agacactgca acagatgcct cctagaaaat gctgtttgtg
1081 gccgggcgcg gtggctcacg cctgtaatcc cagcactttg ggaggccgag gccggtgatt
1141 cacaaggtca ggagttcaag accagcctgg ccaagatggt gaaatcctgt ctctaataaa
1201 aatacaaaaa ttagccaggc gtggtggcag gcacctgtaa tcccagctac tcgggaggct
1261 gaggcaggag aattgcttga accaaggtgg cagaggttgc agtaagccaa gatcacacca
1321 ctgcactcca gcctgggtga tagagtgaga cactgtcttg acaaaaaaaa aaaaaaaaa
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