LOCUS BC019883 1869 bp mRNA linear HUM 13-OCT-2005 DEFINITION Homo sapiens C-type lectin domain family 2, member D, mRNA (cDNA clone MGC:30031 IMAGE:4524891), complete cds. ACCESSION BC019883 VERSION BC019883.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1869) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1869) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52426785. FEATURES Location/Qualifiers source 1..1869 /db_xref="H-InvDB:HIT000038703" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:30031 IMAGE:4524891" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1869 /gene="CLEC2D" /gene_synonym="CLAX" /gene_synonym="LLT1" /gene_synonym="OCIL" /db_xref="GeneID:29121" /db_xref="HGNC:HGNC:14351" /db_xref="IMGT/GENE-DB:14351" /db_xref="MIM:605659" CDS 8..472 /gene="CLEC2D" /gene_synonym="CLAX" /gene_synonym="LLT1" /gene_synonym="OCIL" /codon_start=1 /product="CLEC2D protein" /protein_id="AAH19883.1" /db_xref="GeneID:29121" /db_xref="HGNC:HGNC:14351" /db_xref="IMGT/GENE-DB:14351" /db_xref="MIM:605659" /translation="MHDSNNVEKDITPSELPANPGCVHSKEHSIKATLIWRLFFLIMF LTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRF CDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ" BASE COUNT 605 a 315 c 355 g 594 t ORIGIN 1 aggcaaaatg catgacagta acaatgtgga gaaagacatt acaccatctg aattgcctgc 61 aaacccaggt tgtgtgcatt caaaagagca ttctattaaa gctaccttaa tttggcgctt 121 atttttctta atcatgtttc tgacaatcat agtgtgtgga atggttgctg ctttaagtgc 181 aataagagct aactgccatc aagagccatc agtatgtctt caagctgcat gcccagaaag 241 ctggattggt tttcaaagaa agtgtttcta tttttctgat gacaccaaga actggacatc 301 aagtcagagg ttttgtgact cacaagatgc tgatcttgct caggttgaaa gcttccagga 361 actgaatttc ctgttgagat ataaaggccc atctgatcac tggattgggc tgagcagaga 421 acaaggccaa ccatggaaat ggataaatgg tactgaatgg acaagacagt aagttctaaa 481 aatctggcag taatatttgt atttgaattt actttgcatt aaatctgaag tgttctctag 541 ttacatgctt taaaaaattc tcattttaag gttagtcatg aaagaagatg gtgccaactt 601 gtatgttgca aaggtttcac aagttcctcg aatgaatcca agacctgtca tggtgaggta 661 gactgactgt gaacttggct ccaggcttat ctatgtcatt ttcaaacact ttcattttaa 721 gcaaaccata caatatcttt aagtctgttc cttacctcca caacaaaatt aaattgcact 781 tgtcctcctg atttcacagg gttgatgtga ggaacagagg ttttgatgta tcagggaaag 841 attatgagtg acagcaatta tacctattat ttaaaataag acaatagttt taaaatttta 901 aaatgggtaa agtttggcac tagaaaattt aatctcaatt gtatatttat aggatcttca 961 gattactaaa aagatttgag ataatgctgg aaaaattgga ttcacacaat ttcactcaat 1021 gtttgtctga gagatgagac agttttgaaa agctacttta ttgtaataca ttcatcaata 1081 ttggaaatat aactttattt aataaaaaga gccccagact ggacattggc aggtttgaaa 1141 tgagtttttt ctcattagct tttgaccttg gatgggatgg taagttttag aaatcagaga 1201 acatgtacat ttatacattg ttgtatctac actgccttgc acattgtgac tgcttcataa 1261 atatctagaa ttaactttta tttcttattt tacaatacgg aagtagtaaa ttttctctac 1321 ctaattctta aaatggtttt ttgtttgttt gtatttttga gagacagggt cttactctgt 1381 tacccaggct ggagtgcagt agtaccatcg tggctcactg cagccttgac ttccctggct 1441 caagtgagcc tcccatctca ggctcctgag tagctgggac tacaggtttc ctatcctggg 1501 agcaggagag tgtgcctatt tgaatgacaa aggtgccagt agtgccaggc actacacaga 1561 gaggaagtgg atttgttcca aatcagatat acatgtctag atgttacagc aaagccccaa 1621 ctaatcttta gaagcatatt ggaactgata actccatttt aaaatgagca aagaatttat 1681 ttcttatacc aacaggtata tgaaaatatg ctcaatatca ctaataactg ggaaaataca 1741 aatcaaaatc atagtaaaat attacctgtt ttcatggtgc taatattacc tgttctccca 1801 ctgctaatga catacccgag actgagtaat ttataaataa aagagattta attgaaaaaa 1861 aaaaaaaaa //