LOCUS BC019825 2344 bp mRNA linear HUM 08-SEP-2006 DEFINITION Homo sapiens spondin 1, extracellular matrix protein, mRNA (cDNA clone IMAGE:4942973), partial cds. ACCESSION BC019825 VERSION BC019825.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2344) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2344) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: i Column: 9. FEATURES Location/Qualifiers source 1..2344 /db_xref="H-InvDB:HIT000089961" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4942973" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2344 /gene="SPON1" /gene_synonym="f-spondin" /gene_synonym="KIAA0762" /gene_synonym="MGC10724" /db_xref="GeneID:10418" /db_xref="HGNC:HGNC:11252" /db_xref="MIM:604989" CDS <1..782 /gene="SPON1" /gene_synonym="f-spondin" /gene_synonym="KIAA0762" /gene_synonym="MGC10724" /codon_start=3 /product="SPON1 protein" /protein_id="AAH19825.1" /db_xref="GeneID:10418" /db_xref="HGNC:HGNC:11252" /db_xref="MIM:604989" /translation="TVNEECSPSSCLMTEWGEWDECSATCGMGMKKRHRMIKMNPADG SMCKAETSQAEKCMMPECHTIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDC NEDLEQVEKCMLPECPIDCELTEWSQWSECNKSCGKGHVIRTRMTQMEPQFGGAPCPE TVQRKKCRIRKCLRNPSIQKLRWREARESRRSEQLKEESEGEQFPGCRMRPWTAWSEC TKLCGGGIQERYMTVKKRFKSSQFTSCKDKKEIRACNVHPC" BASE COUNT 673 a 523 c 552 g 596 t ORIGIN 1 gcacggtcaa cgaggagtgc tctcccagca gctgcctgat gaccgagtgg ggcgagtggg 61 acgagtgcag cgccacctgc ggcatgggca tgaagaagcg gcaccgcatg atcaagatga 121 accccgcaga tggctccatg tgcaaagccg agacatcaca ggcagagaag tgcatgatgc 181 cagagtgcca caccatccca tgcttgctgt ccccatggtc cgagtggagt gactgcagcg 241 tgacctgcgg gaagggcatg cgaacccgac agcggatgct caagtctctg gcagaacttg 301 gagactgcaa tgaggatctg gagcaggtgg agaagtgcat gctccctgaa tgccccattg 361 actgtgagct caccgagtgg tcccagtggt cggaatgtaa caagtcatgt gggaaaggcc 421 acgtgattcg aacccggatg acccaaatgg agcctcagtt tggaggtgca ccctgcccag 481 agactgtgca gcgaaaaaag tgccgcatcc gaaaatgcct tcgaaatcca tccatccaaa 541 agctacgctg gagggaggcc cgagagagcc ggcggagtga gcagctgaag gaagagtctg 601 aaggggagca gttcccaggt tgtaggatgc gcccatggac ggcctggtca gaatgcacca 661 aactgtgcgg aggtggaatt caggaacgtt acatgactgt aaagaagaga ttcaaaagct 721 cccagtttac cagctgcaaa gacaagaagg agatcagagc atgcaatgtt catccttgtt 781 agcaagggta cgagttcccc agggctgcac tctagattcc agagtcacca atggctggat 841 tatttgcttg tttaagacaa tttaaattgt gtacgctagt tttcattttt gcagtgtggt 901 tcgcccagta gtcttgtgga tgccagagac atcctttctg aatacttctt gatgggtaca 961 ggctgagtgg ggcgccctca cctccagcca gcctcttcct gcagaggagt agtgtcagcc 1021 accttgtact aagctgaaac atgtccctct ggagcttcca cctggccagg gaggacggag 1081 actttgacct actccacatg gagaggcaac catgtctgga agtgactatg cctgagtccc 1141 agggtgcggc aggtaggaaa cattcacaga tgaagacagc agattcccca cattctcatc 1201 tttggcctgt tcaatgaaac cattgtttgc ccatctcttc ttagtggaac tttaggtctc 1261 ttttcaagtc tcctcagtca tcaatagttc ctggggaaaa acagagctgg tagacttgaa 1321 gaggagcatt gatgttgggt ggcttttgtt ctttcactga gaaattcgga atacatttgt 1381 ctcacccctg atattggttc ctgatgcccc cccaacaaaa ataaataaat aaattatggc 1441 tgctttattt aaatataagg tagctagttt ttacacctga gataaataat aagcttagag 1501 tgtatttttc ccttgctttt gggggttcag aggagtatgt acaattcttc tgggaagcca 1561 gccttctgaa ctttttggta ctaaatcctt attggaacca agacaaagga agcaaaattg 1621 gtctctttag agaccaattt gcctaaattt taaaatcttc ctacacacat ctagacgttc 1681 aagtttgcaa atcagttttt agcaagaaaa catttttgct atacaaacat tttgctaagt 1741 ctgcccaaag cccccccaat gcattccttc aacaaaatac aatctctgta ctttaaagtt 1801 attttagtca tgaaatttta tatgcagaga gaaaaagtta ccgagacaga aaacaaatct 1861 aagggaaagg aatattatgg gattaagctg agcaagcaat tctggtggaa agtcaaacct 1921 gtcagtgctc cacaccaggg ctgtggtcct cccagacatg cataggaatg gccacaggtt 1981 tacactgcct tcccagcaat tataagcaca ccagattcag ggagactgac caccaaggga 2041 tagtgtaaaa ggacattttc tcagttgggt ccatcagcag tttttcttcc tgcatttatt 2101 gttgaaaact attgtttcat ttcttctttt ataggcctta ttactgctta atccaaatgt 2161 gtaccattgg tgagacacat acaatgctct gaatacacta cgaatttgta ttaaacacat 2221 cagaatattt ccaaatacaa catagtatag tcctgaatat gtacttttaa cacaagagag 2281 actattcaat aaaaactcac tgggtctttc atgtctttaa gctaaaaaaa aaaaaaaaaa 2341 aaaa //