LOCUS       BC019824                1084 bp    mRNA    linear   HTC 10-JUN-2008
DEFINITION  Homo sapiens protein tyrosine phosphatase, receptor type, J, mRNA
            (cDNA clone IMAGE:4454331), with apparent retained intron.
ACCESSION   BC019824
VERSION     BC019824.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1084)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 42 Row: c Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis
            This clone has the following problem: retained intron.
FEATURES             Location/Qualifiers
     source          1..1084
                     /db_xref="H-InvDB:HIT000089960"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4454331"
                     /tissue_type="Kidney, hypernephroma"
                     /clone_lib="NIH_MGC_89"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
BASE COUNT          279 a          204 c          298 g          303 t
ORIGIN      
        1 aggaaccctc ttcccttccg cctggtgtgg gcttgggaaa tgggcaagcg gccccagcaa
       61 tcatgggagg aactcttgcg ggggagcggt ctgggattcc aaatgggcag gtcacacgaa
      121 ggtcacgatg cttctctgca tcctgaaaag ggctggggac agggccagtg ggggtggtaa
      181 gggtatttat agcacagtgc ttgaaaaggg aagattaatg tgtaaatata aaggacacac
      241 aggctggggg ttggtcagag gcaagaggag ggtgcctctg agcttcaacc cctcccagga
      301 acaatgagct caaattggaa gagtccagtg gaatcggggg gatggtgtga gcgcccctgt
      361 tcagtctttg acaattgcat acagaaaagc agctggtatg ggtttgggtg tcaatgaaag
      421 ggccaaagac tggtggccag ctggtttggg ggatttgggc cattgatagc atctcccagg
      481 aacaacgact ttttgcctcc aaagttggat ctagtgatga tcagcaccag caggaaatga
      541 catttggtgt ctgcccactg cagccatact gtgacctcca gccagacttc cgcctaattg
      601 actccactgg atttgtgctc tgttgagtca gaggctcccg ggggttgggg atcgaggggc
      661 gggggtcagc tatgcagccc atcacgtgtg tttttcatct gggatgaaaa agcctggttc
      721 tcttttgaaa tgcttgattg tacttattga gctaaacaag tcttggtgac tgttgttgat
      781 ttgcctcaaa agttttaagt cctgggtttt cagactactg tgtagcagct gtgtgtttaa
      841 catactgtag ctttttctcc cttgggggca catacaaata ggatgtgttg atgtggactc
      901 taaactgtaa ttttcctgta actattttgg aatgatgcat atttctaatg tttgttatac
      961 ttgtacagag tattgctgtt ggttgctttt tttttttttt aaggaaaaaa tggcctgaaa
     1021 acattttttt aaagacttac aaataccaaa tataaaaaaa tgtcaatgca aaaaaaaaaa
     1081 aaaa
//