LOCUS BC019628 1343 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens chromosome 18 open reading frame 51, mRNA (cDNA clone
IMAGE:4511101), complete cds.
ACCESSION BC019628
VERSION BC019628.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1343)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1343)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1343
/db_xref="H-InvDB:HIT000089936"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4511101"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1343
/gene="C18orf51"
/db_xref="GeneID:125704"
/db_xref="HGNC:HGNC:31729"
CDS 194..556
/gene="C18orf51"
/codon_start=1
/product="C18orf51 protein"
/protein_id="AAH19628.1"
/db_xref="GeneID:125704"
/db_xref="HGNC:HGNC:31729"
/translation="MAFFEPKMREILEQNCTGDEDCNFFDCFSRCDLRVNKCGAQRVN
NNLQVICDKIFRHWFSAPLKSSAVSFQLQLQLQEAVQECADPGVPSGNTRRAASSVFW
KLRQLLQATLRELQEAEK"
BASE COUNT 307 a 295 c 400 g 341 t
ORIGIN
1 ggacgcccga gagtttgtgc agcctgggag acggcggggg gtttgattca ggggtgcccg
61 tgggaagggg agggctgggt cgtcccagaa cctactgact gtcctcgacc cccgactctc
121 tgcatgctcc ggatctcact cccgggaggg cccggagaaa acccaagttg gggtggtggc
181 tattgatgtg gacatggcct tttttgaacc taaaatgagg gaaatccttg agcaaaactg
241 cacaggagat gaagactgca atttctttga ctgtttttca agatgtgatt tacgagtcaa
301 caaatgcgga gcgcagcgcg taaacaacaa cctgcaggtc atctgtgaca aaatatttcg
361 ccattggttt tccgcgcctc tcaagagctc tgcggtctct ttccagcttc agctgcagtt
421 acaggaggcg gtgcaggaat gtgcagaccc tggggtcccc agtgggaaca cccggagagc
481 agcctccagc gtgttctgga agcttcgcca actcctccaa gccacactga gggagctgca
541 ggaggcagag aagtagccac tctctggcct taaacatgct cacacaggaa aagtgacctt
601 ggctggattt cttctgccat tgttttaaag atgagccatt tcccctgtgc tctctggggt
661 gccgttctgg tctccacatt gtggagtggc aagtgctgct gccagagaca gtgctccctc
721 gctctcgtcc caccctggcc tctgacctgt cgccttgtgt aaaatgagat gagggaggag
781 gtacagacct cccttcagga gggctctcgg tcagaagaca ccaacctgtg tgcacttatt
841 ctctgcagag agcacttgta cctggttatc ccagcacgag ttccagctgt tctttcctgt
901 aaatcgttac cacgttaaaa agtgtgcgtg tgtgcataca aatgatgtgt atgcctgtgt
961 ctgggtgcaa atgagcatgt gagcatgtgt gagtgtgccc atgagtgtct gcatgtgtgt
1021 gagtgtgcac aggtgagtgt gcacaggtga gtgtggtgtg ctcatgagga gtatgagtat
1081 gcctgagtgt gaatatgtat gagtgtgaat gagtgtgtgc acatgagtgc acgggtgtca
1141 gcatgtgtat ataagtgtgg gcatgtgtat gtgattgtgt gagtgtgggc aggtgagtgt
1201 gttggggatg tgggttaggg tggggagtgg tgctttctct agtgtgtcct ccggaacatc
1261 ttgcctacct agcaaagaag tgtgaccatt ctttcggaat taaatacaat aaaaagaaaa
1321 taagctgcaa aaaaaaaaaa aaa
//