LOCUS BC019598 2241 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens zinc finger, matrin type 4, mRNA (cDNA clone MGC:24845
IMAGE:4934088), complete cds.
ACCESSION BC019598
VERSION BC019598.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2241)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2241)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375886.
FEATURES Location/Qualifiers
source 1..2241
/db_xref="H-InvDB:HIT000038668"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24845 IMAGE:4934088"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2241
/gene="ZMAT4"
/gene_synonym="FLJ13842"
/db_xref="GeneID:79698"
CDS 133..594
/gene="ZMAT4"
/gene_synonym="FLJ13842"
/codon_start=1
/product="ZMAT4 protein"
/protein_id="AAH19598.1"
/db_xref="GeneID:79698"
/translation="MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRL
YYMLHPRDGGCPAKRLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKR
LKLLLGEKTPLKTTGLRRNYRCAICSVSLNSIEQYHAHLKGSKHQTNLKNK"
BASE COUNT 661 a 488 c 495 g 597 t
ORIGIN
1 gccgaaaggt ctggtcgcag agacaggaac gtgtaatcct cagcgtgctc cagcccacag
61 cttcgctcta ctgctcggca gggcagctgg cctctgggca ccggcggccc ctctgcctcg
121 cggaaaagcc tgatgaagtc ctccgatatt gatcaggatt tattcacaga cagttactgc
181 aaggtgtgca gtgcacagct gatctccgaa tcgcagcgtg tggcccacta cgagagtcga
241 aaacatgcaa gcaaagtccg actgtattac atgcttcacc ccagggatgg agggtgtcct
301 gccaagaggc tccggtcaga aaatggaagt gatgccgaca tggtggataa gaacaagtgc
361 tgcacactct gcaacatgtc attcacttca gcggtggtgg ccgattccca ttatcaaggc
421 aaaatccacg ccaagaggtt aaaactcttg ctaggagaga agaccccatt aaagaccaca
481 ggtctgaggc gcaattacag atgtgccatc tgcagtgtct ccctaaactc aatagaacag
541 tatcatgccc atctgaaagg atctaaacac cagaccaacc tgaagaataa gtagtgaaag
601 catcaatcaa gacataagaa caaaacatta gcatttctct gccgtggaga attgcttatc
661 aaccaccaga ggaggcttct ttcttgaaca ataaacattt cttataagga ttcacagatt
721 cacatacgac tgatcttgat ttttggaaat gaatgaggtt tcttttttct ttttcctttt
781 tttaattttg gggtaagtta tgatatttgg atggattttt aaattctttc ctgataacat
841 atttagcaca tgttctaaat tataatccta tagcaaacag ttggagcatt attcaaactg
901 aaagtggaaa aatttaaatt tccaatttat tctagatttc ctcagagcat aattattctg
961 ttaaatcctc aatgagtgtg atgtaaacca cctctatcca gaaatataca ttcttttctc
1021 atcatgttgg acacagttga gggtgacatg cacagaactg gaacagatca ctattagtgg
1081 aaaataccaa atggacaaat aaataccagt cgttttctcc gttctccaag cacaggagcc
1141 aggtttacca tctgaacaat gaagacgaag ggagtaaata aaggaagaat tctcatcttt
1201 tttcctgatc attcaaagaa cagtttctca aggttaagcc aagtcctcct tgcaagttgc
1261 caaataatag cttaggaaaa gaattagtct gcctgcatga tgatcttctt aggcaaaaac
1321 gtcttcacag cccttgacct tggtgaattt ttttccccaa aagcatccaa aagaagaatt
1381 ataaacccca gaatgagatg gaaataaaca agtatttttt ttttatgatg tttggcctga
1441 actgtgggct ttaattgggg gatactgatc gtttggaaag aagtgagaaa attctgaaga
1501 aatggcggcc ttgggctagg cggggtcccc tatttcttct gtttctcact gaagtcctac
1561 tgctgagcca agactcagtc actctggaaa gagcatgacc gataaagaaa acagttcctt
1621 tctgatgggg agcgtctgag tgcagatcat gaggctcttt ctctaggttt aattcttttc
1681 catggtgacc ggacttggtg tcttgtagcc tggttacgaa gtgggacgtt gagcttctac
1741 tgacgatgcc ctgcatggac cagctgggat ctggctgggg ctgccctgtg tccctaacga
1801 ccataggcaa tccatcttct tgtgtcagca atttctggac acccactgtt ttccaccaag
1861 agctgaggtg gcaacaactc agtgagcaat aaacaaaatg acacagaaat gcacagtgtt
1921 gttatgaagg agcctgttta cctgtgttca aaatctggca ccattccctt gagcagggcc
1981 cgctcaggag ggaccaggtc tgccagtttc tgtgcctgca gagagacgaa gccccacgag
2041 ccacacccta ctctacaaga ggaaaggggg ttggatggga agaatctatt ttgctgtttt
2101 ggaaagcaca cagccgacct acaaacctcc tgtgatggtg tttcttcgga tgtgtaaaat
2161 aaggctttat ttgtcaattc cgctgtaaaa taagcattgt ccgagtaaaa acagcagcaa
2221 caacaaaaaa aaaaaaaaaa a
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