LOCUS BC019582 2373 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tRNA splicing endonuclease 2 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:24987 IMAGE:3872331), complete cds.
ACCESSION BC019582
VERSION BC019582.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2373)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314730.
FEATURES Location/Qualifiers
source 1..2373
/db_xref="H-InvDB:HIT000038664"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24987 IMAGE:3872331"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2373
/gene="TSEN2"
/gene_synonym="MGC2776"
/gene_synonym="MGC4440"
/gene_synonym="SEN2"
/gene_synonym="SEN2L"
/db_xref="GeneID:80746"
/db_xref="HGNC:HGNC:28422"
/db_xref="MIM:608753"
CDS 370..1767
/gene="TSEN2"
/gene_synonym="MGC2776"
/gene_synonym="MGC4440"
/gene_synonym="SEN2"
/gene_synonym="SEN2L"
/codon_start=1
/product="tRNA splicing endonuclease 2 homolog (S.
cerevisiae)"
/protein_id="AAH19582.1"
/db_xref="GeneID:80746"
/db_xref="HGNC:HGNC:28422"
/db_xref="MIM:608753"
/translation="MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEM
INNNVIVRNAEDIEQLYGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSK
RYQHSVEWAAELMRRQGQDESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSN
MEGTAGGERPSVVNGDSGKSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLP
HVCCCKQDALILQRGLHHEDGSQHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNE
ELVQRNRLICRRNPYRIFEYLQLSLEEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTV
VQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFE
GSLRRPLSWKSLAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQEVIL
SRWVSSRERSDQDDL"
BASE COUNT 661 a 508 c 616 g 588 t
ORIGIN
1 gggcgaggaa agcgcggccc tttccgagtt tggtgttttg cagcgaaagg aaatctcgct
61 cttccgaaag tcctccaggg cgagagagga aagggcctag gtactgtgct ggggtcgcac
121 agccggccga gacagtgccg ggacggggag ccaggcttcc gagtgcgccc ggtcactgac
181 tcctccgcgc tttcctcgtg cgcctgcagc ccttggttct tggaaacgcc ggcgccttgt
241 tcagggctgg tggggctggg gcgcaaggtg cagctgacaa tgcccgagag gagccgcagc
301 ctctggtgga gttcggtcgg gtgtgggggt agtcaaggaa agaagcaaag ggaatacctc
361 ctctgaaaaa tggcagaagc agttttccat gccccaaaga ggaaaagaag agtgtatgag
421 acttacgagt ctccattgcc aatccctttt ggtcaggacc atggtcctct gaaagaattc
481 aagatattcc gtgctgaaat gattaacaac aatgtgattg tgaggaatgc ggaggacatt
541 gagcagctct atgggaaagg ttattttgga aaaggtattc tttcaagaag ccgtccaagc
601 ttcacaattt cagatcctaa actggttgct aaatggaaag atatgaagac aaacatgcct
661 atcatcacat caaagaggta tcagcatagt gttgagtggg cagcagagct gatgcgtaga
721 caggggcagg atgagagtac agtgcgcaga atcctcaagg attacacgaa accgcttgag
781 catcctcctg tgaaaaggaa tgaagaggct caagtgcatg acaagcttaa ctctggaatg
841 gtttccaaca tggaaggcac agcaggggga gagagacctt ctgtggtaaa cggggactct
901 ggaaagtcag gtggtgtggg tgatccccgt gagccattag gctgcctgca ggagggctct
961 ggctgccacc caacaacaga gagctttgag aaaagcgtgc gagaggatgc ctcacctctg
1021 ccccatgtct gttgctgcaa acaagatgct ctcatcctcc agcgtggcct tcatcatgaa
1081 gacggcagcc agcacatcgg cctcctgcat cctggggaca gagggcctga ccatgagtac
1141 gtgctggtcg aggaagcgga gtgtgccatg agcgagaggg aggctgcccc aaatgaggaa
1201 ttggtgcaaa gaaacaggtt aatatgcaga agaaatccat ataggatctt tgagtatttg
1261 caactcagcc tagaagaggc ctttttcttg gtctatgctc tgggatgttt aagtatttac
1321 tatgagaagg agcctttaac gatagtgaag ctctggaaag ctttcactgt agttcagccc
1381 acgttcagaa ccacctacat ggcctaccat tactttcgaa gcaagggctg ggtgcccaaa
1441 gtgggactca agtacgggac agatttactg ctatatcgga aaggccctcc attttaccat
1501 gcaagttatt ctgtcattat cgagctagtt gatgaccatt ttgaaggctc tctccgcagg
1561 cctctcagtt ggaagtccct ggctgccttg agcagagttt ccgttaatgt ctctaaggaa
1621 cttatgctgt gctatttgat taaaccctct actatgactg acaaggaaat ggagtcacca
1681 gaatgtatga aaaggattaa agttcaggag gtgattctga gtcgatgggt ttcttcacga
1741 gagaggagtg accaagacga tctttaacaa ttcaacctca aatttctaat ttcaccaaca
1801 actatttatt gagggctagg taaaaagttc tttttgttgt aatcgtccat taattcataa
1861 gttttaaagg gcatggtgct cccagcacca gaaaactatc agtgttttta aagataaatt
1921 acacaaggga ggagaaagat ccctgtgcta ggacaacaga ttctatactt gcgttggcct
1981 ctaactcccc catccagagc ctcctgcctc tggcgtcagt tttttccctc atccactcac
2041 tggggagatt ggactagagg agtcctgaga ggacacttcc aacaagagac atttattctc
2101 tgattttacc tgaaaatggt agtagtttac atttatacag tacagtttat gaagcacttt
2161 catacgcagg catctcttgt tacctacatc taagctgttc ccgaaagagt gttacagaac
2221 acaacagtat tgtacaatat tcgataagca tatcttcact gcacttgtta taaaaatgag
2281 tggtgaaata atgtttggag acataatgaa agcgattaac atttggcaaa atataataaa
2341 gcctttttgt aattggtgaa aaaaaaaaaa aaa
//