LOCUS BC019580 2542 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein M, mRNA (cDNA clone MGC:24927 IMAGE:4938259), complete cds. ACCESSION BC019580 VERSION BC019580.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2542) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2542) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: o Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14141151. FEATURES Location/Qualifiers source 1..2542 /db_xref="H-InvDB:HIT000038663" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24927 IMAGE:4938259" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2542 /gene="HNRPM" /gene_synonym="HNRNPM" /gene_synonym="HNRNPM4" /gene_synonym="HNRPM4" /gene_synonym="HTGR1" /db_xref="GeneID:4670" /db_xref="HGNC:HGNC:5046" /db_xref="MIM:160994" CDS 10..2202 /gene="HNRPM" /gene_synonym="HNRNPM" /gene_synonym="HNRNPM4" /gene_synonym="HNRPM4" /gene_synonym="HTGR1" /codon_start=1 /product="heterogeneous nuclear ribonucleoprotein M" /protein_id="AAH19580.1" /db_xref="GeneID:4670" /db_xref="HGNC:HGNC:5046" /db_xref="MIM:160994" /translation="MAAGVEAAAEVAATEIKMEEESGAPGVPSGNGAPGPKGEGERPA QNEKRKEKNIKRGGNRFEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVE LLMDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKV MATTGGMGMGPGGPGMITIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWK KLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHV KMDERALPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGM GMEGIGFGINKMGGMEGPFGGGMENMGRFGSGMNMGRINEILSNALKRGEIIAKQGGG GGGGSVPGIERMGPGIDRLGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSVERM GSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQTI ERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERM GLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIE MERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYA DIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA" BASE COUNT 707 a 507 c 800 g 528 t ORIGIN 1 gcggagaaaa tggcggcagg ggtcgaagcg gcggcggagg tggcggcgac ggagatcaaa 61 atggaggaag agagcggcgc gcccggcgtg ccgagcggca acggggctcc gggccctaag 121 ggtgaaggag aacgacctgc tcagaatgag aagaggaagg agaaaaacat aaaaagagga 181 ggcaatcgct ttgagccata tgccaatcca actaaaagat acagagcctt cattacaaac 241 ataccttttg atgtgaaatg gcagtcactt aaagacctgg ttaaagaaaa agttggtgag 301 gtaacatacg tggagctctt aatggacgct gaaggaaagt caaggggatg tgctgttgtt 361 gaattcaaga tggaagagag catgaaaaaa gctgcggaag tcctaaacaa gcatagtctg 421 agcggaagac cactgaaagt caaagaagat cctgatggtg aacatgccag gagagcaatg 481 caaaaggtga tggctacgac tggtgggatg ggtatgggac caggtggccc aggaatgatt 541 actatcccac ccagtatcct aaataatccc aacatcccaa atgagattat ccatgcatta 601 caggctggaa gacttggaag cacagtattt gtagcaaatc tggattataa agttggctgg 661 aagaaactga aggaagtatt tagtatggct ggtgtggtgg tccgagcaga cattcttgaa 721 gataaagatg gaaaaagtcg tggaataggc actgttactt ttgaacagtc cattgaagct 781 gtgcaagcta tatctatgtt caatggccag ctgctatttg atagaccaat gcacgtcaag 841 atggatgaga gggccttacc aaaaggagat ttcttccctc ctgagcgtcc acaacaactt 901 ccccatggcc ttggtggtat tggcatgggg ttaggaccag gagggcaacc cattgatgcc 961 aatcacctga ataaaggcat cggaatggga aacataggtc ccgcaggaat gggaatggaa 1021 ggcataggat ttggaataaa taaaatggga ggaatggagg ggccctttgg tggtggtatg 1081 gaaaacatgg gtcgatttgg atctgggatg aacatgggca ggataaatga aatcctaagt 1141 aatgcactga agagaggaga gatcattgca aagcagggag gaggtggagg tggaggaagc 1201 gtccctggga tcgagaggat gggtcctggc attgaccgcc tcgggggtgc cggcatggag 1261 cgcatgggcg cgggcctggg ccacggcatg gatcgcgtgg gctccgagat cgagcgcatg 1321 ggcctggtca tggaccgcat gggctccgtg gagcgcatgg gctccggcat tgagcgcatg 1381 ggcccgctgg gcctcgacca catggcctcc agcattgagc gcatgggcca gaccatggag 1441 cgcattggct ctggcgtgga gcgcatgggt gccggcatgg gcttcggcct tgagcgcatg 1501 gccgctccca tcgaccgtgt gggccagacc attgagcgca tgggctctgg cgtggagcgc 1561 atgggccctg ccatcgagcg catgggcctg agcatggagc gcatggtgcc cgcaggtatg 1621 ggagctggcc tggagcgcat gggccccgtg atggatcgca tggccaccgg cctggagcgc 1681 atgggcgcca acaatctgga gcggatgggc ctggagcgca tgggcgccaa cagcctcgag 1741 cgcatgggcc tggagcgcat gggtgccaac agcctcgagc gcatgggccc cgccatgggc 1801 ccggccctgg gcgctggcat tgagcgcatg ggcctggcca tgggtggcgg tggcggtgcc 1861 agctttgacc gtgccatcga gatggagcgt ggcaacttcg gaggaagctt cgcaggttcc 1921 tttggtggag ctggaggcca tgctcctggg gtggccagga aggcctgcca gatatttgtg 1981 agaaatctgc cattcgattt cacatggaag atgctaaagg acaaattcaa cgagtgcggc 2041 cacgtgctgt acgccgacat caagatggag aatgggaagt ccaaggggtg tggtgtggtt 2101 aagttcgagt cgccagaggt ggccgagaga gcctgccgga tgatgaatgg catgaagctg 2161 agtggccgag agattgacgt tcgaattgat agaaacgctt aagcagttgc cttttttaaa 2221 catcgatacg agacctctga atttgtattt tttcttgtta accattttaa tttgttggct 2281 ggatgtataa agatgtttaa aaaattcagt tgctttttgg ggtaatttga attacttttt 2341 taatgactgg ggttccattt gactgtttgc attgagattg caatgtgcgc aatttttttt 2401 gtagttgtgg catcttgttg acatcgaata tgactttgat aataaatacc ggttcctgaa 2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2521 aaaaaaaaaa aaaaaaaaaa aa //