LOCUS BC019442 3266 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus transmembrane protein 63a, mRNA (cDNA clone MGC:25803
IMAGE:4036849), complete cds.
ACCESSION BC019442
VERSION BC019442.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3266)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3266)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lothar Hennighausen Ph.D., Robin Humphreys
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 30 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450146.
FEATURES Location/Qualifiers
source 1..3266
/organism="Mus musculus"
/mol_type="mRNA"
/strain="mix FVB/N, C57BL/6J"
/db_xref="taxon:10090"
/clone="MGC:25803 IMAGE:4036849"
/tissue_type="Mammary tumor. WAP-TGF alpha model. 7 months
old, gross tissue."
/clone_lib="NCI_CGAP_Mam5"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3266
/gene="Tmem63a"
/gene_synonym="MGC11687"
/gene_synonym="MGC25803"
/gene_synonym="Tmem64a"
/db_xref="GeneID:208795"
/db_xref="MGI:MGI:2384789"
CDS 57..2471
/gene="Tmem63a"
/gene_synonym="MGC11687"
/gene_synonym="MGC25803"
/gene_synonym="Tmem64a"
/codon_start=1
/product="transmembrane protein 63a"
/protein_id="AAH19442.1"
/db_xref="GeneID:208795"
/db_xref="MGI:MGI:2384789"
/translation="MTSSPFLDPWPSKAVFVRERLGLGERPNDSYCYNSAKNSTVLQG
VTFGGIPTVLLLDVSCFLFLILVFSIIRRRFWDYGRIALVSEAGSEARFQRLSSSSSG
QQDFENELGCCPWLTAIFRLHDDQILEWCGEDAIHYLSFQRHIIFLLVVISFLSLCVI
LPVNLSGDLLGKDPYSFGRTTIANLQTDNDLLWLHTVFSVIYLFLTVGFMWHHTRSIR
YKEESLVRQTLFITGLPREARKETVESHFRDAYPTCEVVDVQLCYSVAKLIYLCKERK
KTEKSLTYYTNLQAKTGRRTLINPKPCGQFCCCEVQGCEREDAISYYTRMNDSLLERI
TAEESRVQDQPLGMAFVTFREKSMATYILKDFNACKCQGLRCKGEPQPSSYSRELCVS
KWTVTFASYPEDICWKNLSIQGVRWWLQWLGINFSLFVVLFFLTTPSIIMSTMDKFNV
TKPIHALNNPVISQFFPTLLLWSFSALLPSIVYYSTLLESHWTRSGENRIMVSKVYIF
LIFMVLILPSLGLTSLDFFFRWLFDKTSSETSIRLECVFLPDQGAFFVNYVIASAFIG
SGMELLRLPGLILYTFRMIMAKTAADRRNVKQNQAFEYEFGAMYAWMLCVFTVIMAYS
ITCPIIVPFGLIYILLKHMVDRHNLYFAYLPAKLEKRIHFAAVNQALAAPILCLFWLF
FFSFLRLGLTAPATLFTFLVVLLTILACLLYTCFGCFKHLSPWNYKTEESASDKGSEA
EAHVPPPFTPYVPRILNGLASERTALSPQQQQTYGAIRNISGTLPGQPVAQDPSGTAA
YAYQES"
BASE COUNT 685 a 920 c 853 g 808 t
ORIGIN
1 ctgaccactc ccccgggcgc gcgcgccgcg ccgccgccgc agggagagaa ggcacaatga
61 ccagctcccc gttcctggat ccctggccgt ccaaggctgt gtttgtccgt gagcgcctgg
121 gtcttggcga acgtcccaat gactcctatt gctacaactc agccaaaaac agcactgtgc
181 tccaaggggt cacctttgga ggcatcccca ctgtcctgct cttagatgtc agttgctttc
241 tgtttctaat cctggtgttt tccatcataa ggagaagatt ctgggattat ggccgcatag
301 ccctggtatc agaagcaggc agtgaggcca ggttccagag actgtcctct tcctcctcag
361 ggcaacaaga ctttgaaaac gagctgggat gctgtccttg gctgacggcc atcttccgcc
421 tgcatgacga ccagatcctg gagtggtgcg gagaggacgc catccactac ctgtcttttc
481 agaggcacat catcttcctg ctggtggtga tcagcttctt gtccctgtgt gtcatcttgc
541 ctgtcaacct ctcgggagac ttgctgggta aagaccctta cagctttggg aggacaacga
601 tagctaacct gcagactgac aatgacctcc tctggctgca cactgtcttc agcgtcatct
661 acctcttcct cacggtgggc ttcatgtggc atcacacacg gtccatcaga tacaaagagg
721 agagtctggt gagacaaacc ttgttcatca caggactccc cagagaagcc agaaaggaga
781 ctgtggagag ccacttccga gatgcgtatc ccacgtgtga ggtggtggat gtccagctgt
841 gctacagcgt ggctaagctg atctacctgt gcaaagagag aaagaagacc gagaagagcc
901 ttacctatta cacaaacctg caggcgaaga caggccgacg gaccctcatc aaccccaagc
961 cttgtggcca gttctgctgc tgtgaagttc agggttgtga gcgggaagat gctatttctt
1021 actacactcg aatgaatgac agcctgctgg agaggatcac agccgaagag agccgggtcc
1081 aggaccagcc cctgggaatg gcctttgtca ccttccgtga gaagtccatg gctacctaca
1141 tactgaaaga cttcaatgcc tgcaagtgcc agggccttcg gtgcaaaggg gagccccagc
1201 catcctccta tagcagagag ctctgtgtct ccaagtggac ggtcactttt gcctcctatc
1261 ctgaggacat ctgctggaag aacctctcca tccagggcgt tcgctggtgg ctccagtggc
1321 tgggtatcaa cttctctctg tttgtggtgc tgtttttcct gaccacgccc tccatcatta
1381 tgtctaccat ggacaagttc aatgttacca aacccatcca cgcactgaat aaccccgtca
1441 tcagccagtt cttccccaca ctcctgctgt ggtccttctc tgcgctgctt ccgtccattg
1501 tctactactc cacgctgctg gagtcccact ggacaaggtc aggggaaaac cggatcatgg
1561 tgtcgaaggt ctacatattt ttgatcttca tggtgctgat cctgccctcc ctcggtctca
1621 ccagcttgga tttcttcttc cggtggctct ttgacaaaac ttcctcggaa acctcaatca
1681 ggctagagtg tgtcttcctg ccagaccagg gtgccttctt tgtgaactac gtcatcgcct
1741 cagccttcat cggcagtggc atggagctgt tgcgcctgcc cggcctcatc ctctatacct
1801 tccgcatgat catggccaag acggccgctg accgcaggaa tgttaagcag aaccaggctt
1861 ttgaatacga gtttggagcc atgtatgcgt ggatgctgtg tgtcttcacc gtcatcatgg
1921 cttacagcat cacctgcccc attatcgtgc cctttggcct catctacatc ctgcttaagc
1981 acatggtgga ccggcataac ctctacttcg cttacctccc ggctaaactg gagaagagga
2041 tccacttcgc cgccgtgaac caggccctgg ccgcccccat cctctgcctc ttctggctct
2101 tctttttctc cttcctccgt ctgggtctga cggccccggc cacgctcttc accttcctgg
2161 ttgttctgct caccatcctg gcctgcctgc tgtacacctg ctttggatgc ttcaagcacc
2221 tcagcccatg gaactacaag acagaagaat cagctagtga caaaggaagc gaagccgagg
2281 cccacgtgcc cccgccattc acaccctatg tgcctcggat tctgaacggt ttggcctcag
2341 agaggacagc gttatcccca cagcagcagc agacctacgg tgccatccgt aacatcagtg
2401 ggactcttcc tgggcagccc gtggctcaag atcctagtgg cactgcggct tatgcctacc
2461 aggaatcctg agagtggaca agctggtctg gcaggctggg agcatctagg aataccgagg
2521 gacacaaggg gctagagccc cagacaggct cttgagggtt ttgctgctta aaacccccgt
2581 attgtgagaa gaggaaacca gcgggtcgtg gggctctggg taaccgggct gagggtatcc
2641 atccggtggg gctgctgtcc ctgggagcca tctgtaaggt ttcttttctg gtcccagtgt
2701 ggggaacatt tacagctccc tcttgtggtc atctgaggat atgcactttt attcccccat
2761 acactgctca ggatgctctc tgtagtgagc atggtgtatg tccctagtgg tttgtggcca
2821 agatcatgtg ttgggctttt gcctttaggg agatcatatt tggggacttt tggttgatgg
2881 ggagatgcgt ccaggaaaga cttagtccct ttgagccctg gaacactgct tagccttttg
2941 caagctgatg aatagcgcat cagttgggtt tgagatggag gccatgtggg gccctacagt
3001 actgtcctgc ctgcagtccc ttttcaggga tccatggatt agctgtaggg accggggaat
3061 accttgttct tgttgatggc agcagggcag caggctcatg cccactggtt tgtagctgcc
3121 tcctgctgtg tttccgggtt tttgtatcat gttgcctgaa tctgggctgt gactgggtaa
3181 ccccacagca ggtggggaca tgagaaccat taataaagta cccactgggc tggtggtgaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaa
//