LOCUS BC019355 2001 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 149, mRNA (cDNA clone MGC:13104
IMAGE:3956746), complete cds.
ACCESSION BC019355
VERSION BC019355.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543079.
FEATURES Location/Qualifiers
source 1..2001
/db_xref="H-InvDB:HIT000050731"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13104 IMAGE:3956746"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2001
/gene="RNF149"
/gene_synonym="DNAPTP2"
/gene_synonym="FLJ90504"
/db_xref="GeneID:284996"
/db_xref="HGNC:HGNC:23137"
CDS 80..1282
/gene="RNF149"
/gene_synonym="DNAPTP2"
/gene_synonym="FLJ90504"
/codon_start=1
/product="ring finger protein 149"
/protein_id="AAH19355.2"
/db_xref="GeneID:284996"
/db_xref="HGNC:HGNC:23137"
/translation="MAWRRREASVGARGVLALALLALALCVPGARGRALEWFSAVVNI
EYVDPQTNLTVWSVSESGRFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPG
GRGAAPWVALVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVV
IMISYPKGREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAW
LIFYYIQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENF
KVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDVQEMPAPES
PPGRDPAANLSLALPDDDGSDESSPPSASPAESEPQCDPSFKGDAGENTALLEAGRSD
SRHGGPIS"
BASE COUNT 503 a 430 c 513 g 555 t
ORIGIN
1 gtccgcttct ctctgctctt cgactgcacc gcactcgcgc gtgaccctga ctccccctag
61 tcagctcagc ggtgctgcca tggcgtggcg gcggcgcgaa gccagcgtcg gggctcgcgg
121 cgtgttggct ctggcgttgc tcgccctggc cctgtgcgtg cccggggccc ggggccgggc
181 tctcgagtgg ttctcggccg tggtaaacat cgagtacgtg gacccgcaga ccaacctgac
241 ggtgtggagc gtctcggaga gtggccgctt cggcgacagc tcgcccaagg agggcgcgca
301 tggcctggtg ggcgtcccgt gggcgcccgg cggagacctc gagggctgcg cgcccgacac
361 gcgcttcttc gtgcccgagc ccggcggccg aggggccgcg ccctgggtcg ccctggtggc
421 tcgtgggggc tgcaccttca aggacaaggt gctggtggcg gcgcggagga acgcctcggc
481 cgtcgtcctc tacaatgagg agcgctacgg gaacatcacc ttgcccatgt ctcacgcggg
541 aacaggaaat atagtggtca ttatgattag ctatccaaaa ggaagagaaa ttttggagct
601 ggtgcaaaaa ggaattccag taacgatgac cataggggtt ggcacccggc atgtacagga
661 gttcatcagc ggtcagtctg tggtgtttgt ggccattgcc ttcatcacca tgatgattat
721 ctcgttagcc tggctaatat tttactatat acagcgtttc ctatatactg gctctcagat
781 tggaagtcag agccatagaa aagaaactaa gaaagttatt ggccagcttc tacttcatac
841 tgtaaagcat ggagaaaagg gaattgatgt tgatgctgaa aattgtgcag tgtgtattga
901 aaatttcaaa gtaaaggata ttattagaat tctgccatgc aagcatattt ttcatagaat
961 atgcattgac ccatggcttt tggatcaccg aacatgtcca atgtgtaaac ttgatgtcat
1021 caaagcccta ggatattggg gagagcctgg ggatgtacag gagatgcctg ctccagaatc
1081 tcctcctgga agggatccag ctgcaaattt gagtctagct ttaccagatg atgacggaag
1141 tgatgagagc agtccaccat cagcctcccc tgctgaatct gagccacagt gtgatcccag
1201 ctttaaagga gatgcaggag aaaatacggc attgctagaa gccggcagga gtgactctcg
1261 gcatggagga cccatctcct agcacacgtg cccactgaag tggcaccaac agaagtttgg
1321 cttgaactaa aggacatttt atttttttta ctttagcaca taatttgtat atttgaaaat
1381 aatgtatatt attttaccta ttagattctg atttgatata caaaggacta agatattttc
1441 ttcttgaaga gacttttcga ttagtcctca tatatttatc tactaaaata gagtgtttac
1501 catgaacagt gtgttgcttc agactattac aaagacaact ggggcaggta ctctaatata
1561 aaggacaggt ggtgtttcta aataattggc tgctatggtt ctgtaaaaac cagttaattc
1621 tatttttcaa ggtttttggc aaagcacatc aatgttagac tagttgaagt ggaattgtat
1681 aattcaattc gataattgat ctcatgggct ttccctggag gaaaggtttt ttttgttgtt
1741 ttttttttaa gaacttgaaa cttgtaaact gagatgtctg tagctttttt gcccatctgt
1801 agtgtatgtg aagatttcaa aacctgagag cactttttct ttgtttagaa ttatgagaaa
1861 ggcactagat gactttagga tttgcatttt tccctttatt gcctcatttc ttgtgacgcc
1921 ttgttgggga gggaaatctg tttatttttt cctacaaata aaaagctaag attctatatc
1981 gcaaaaaaaa aaaaaaaaaa a
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