LOCUS BC019349 2204 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane emp24 protein transport domain
containing 7, mRNA (cDNA clone MGC:13042 IMAGE:3625342), complete
cds.
ACCESSION BC019349
VERSION BC019349.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC019349.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255262.
FEATURES Location/Qualifiers
source 1..2204
/db_xref="H-InvDB:HIT000038654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13042 IMAGE:3625342"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2204
/gene="TMED7"
/gene_synonym="CGI-109"
/gene_synonym="FLJ90481"
/db_xref="GeneID:51014"
/db_xref="HGNC:HGNC:24253"
CDS 234..908
/gene="TMED7"
/gene_synonym="CGI-109"
/gene_synonym="FLJ90481"
/codon_start=1
/product="transmembrane emp24 protein transport domain
containing 7"
/protein_id="AAH19349.1"
/db_xref="GeneID:51014"
/db_xref="HGNC:HGNC:24253"
/translation="MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDN
AKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASK
NGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKS
VIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFSDKRTT
TTRVGS"
BASE COUNT 621 a 423 c 446 g 714 t
ORIGIN
1 ccgaccctct caggcctttt ccgcttctct tttacctccc caggtccgcc cgtctgcgcc
61 cctcacagga agccggaggg tcgctctgat cccgaatctc ccacaggcgt gaacctgctc
121 tgctgtgtat ctttgcgggg tggcctgcgc tgaggcctgc cgcgcgcggt gagtccgcgc
181 agacctgacc ctgcgtctcg cagctcggtt gaggccgccg ccgccttctc gggatgccgc
241 ggccggggtc cgcgcagcgc tgggcggccg tcgcgggccg ttgggggtgc aggctgctcg
301 cactgctgct actggtgcct ggacccggcg gcgcctctga gatcaccttc gagcttcctg
361 acaacgccaa gcagtgcttc tacgaggaca tcgctcaggg caccaagtgc accctggagt
421 tccaggtgat tactggtggt cactatgatg tagattgtcg attagaagat cctgatggta
481 aagtgttata caaagagatg aagaaacagt atgatagttt taccttcaca gcctccaaaa
541 atgggacata caaattttgc ttcagcaatg aattttctac tttcacacat aaaactgtat
601 attttgattt tcaagttgga gaagacccac ctttgtttcc tagtgagaac cgagtcagtg
661 ctcttaccca gatggaatct gcctgtgttt caattcacga agctctgaag tctgtcatcg
721 attatcagac tcatttccgt ttaagagaag ctcaaggccg aagccgagca gaggatctaa
781 atacaagagt ggcctattgg tcagtaggag aagccctcat tcttctggtg gttagcatag
841 ggcaggtatt tcttttgaaa agctttttct cagataaaag aaccaccaca actcgtgttg
901 gatcataact acgttttgag aattgatgca ccattgccac tgtaatattg ctgtcctcta
961 attaatttta ggtactgaag aacttaatat tggcaacatt tttaaatcct tactcataca
1021 cttgttggga gggatgtaca atgcatattc ccaaactgtg gaaaggacac ctttttttat
1081 ttgtaaaggt ggaaaaactt tggaactcat tttgggctat tcatgttaaa tattcaacac
1141 caatgatcta ctctgttcgc agttgtttat atctactctt cgcacactaa actttggtat
1201 tttgattcct tttaaccatt taagactact tttcttatag gtagttgata ttttaaaaac
1261 tttagattta atgtctacat gtgttaggga ggaagaaaat tgccttttaa ttgttaataa
1321 gaaaaccaaa tgtgatgaac tgtagcccaa gccctattct gcactgttca gttttatgga
1381 ggaaaaataa atctaccata ggaatgttag ttaatattga tatatcatgg taaaattgat
1441 ttctcactag cttagaaaat gtcagacttt tgtttttggg gtttataatt taaaccagct
1501 atgctatttt ttcataaagg catttgtagt acacagaaaa cagtagtttc agtagtgtaa
1561 aagagtttat acaggcctta aatatcagac tttgtaacag gtagaaatat tacagaataa
1621 tttaagacac tacaatgggg gcaaatgaaa taggaaaatt tttagtgagt tacacgtact
1681 cattacattt tcagtgcttt tacaaggaaa aaaggtgata tgtttaattt taaaatttta
1741 attggctagc tcttgccctt atatgacttt aatgtctgtg agtcattccc agcttaaatt
1801 aacaattgtt agtattagtc tcacacataa gtgccataca ttttatcctc atggatgtga
1861 tgcactgaaa agttagttgc tctccttttt tctttttttt gtcgtgcata ttttatttct
1921 gtagtttctg gttagctacc ctaaagtgat ttaaaaattt agaatgcttt gtgtttccta
1981 tttggtaatc ttcattgact tttctttagt taatgagtat taaatagtgc atattctgta
2041 gactataggg tttacattgt gttgcatctt ataacttgta tagattgagc tgattgaaat
2101 aagattttgt tccaagtatt atctgataga atacaagatg attcaaaatt atatagatat
2161 ttaaagcttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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