LOCUS BC019336 1273 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens ninjurin 1, mRNA (cDNA clone MGC:12777 IMAGE:3617778),
complete cds.
ACCESSION BC019336
VERSION BC019336.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1273)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1273)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543289.
FEATURES Location/Qualifiers
source 1..1273
/db_xref="H-InvDB:HIT000089909"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12777 IMAGE:3617778"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1273
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
CDS 27..485
/gene="NINJ1"
/gene_synonym="NIN1"
/gene_synonym="NINJURIN"
/codon_start=1
/product="ninjurin 1"
/protein_id="AAH19336.2"
/db_xref="GeneID:4814"
/db_xref="HGNC:HGNC:7824"
/db_xref="MIM:602062"
/translation="MDSGTEEYELNGGLPPGTPGSPDASPARWGWRHGPINVNHYASK
KSAAESMLDIALLMANASQLKAVVEQGPSFAFYVPLVVLISISLVLQIGVGVLLIFLV
KYDLNNPAKHAKLDFLNNLATGLVFIIVVVNIFITAFGVQKPLMDMAPQQ"
BASE COUNT 284 a 428 c 343 g 218 t
ORIGIN
1 atcctggcgg cctgggcggc cgcaccatgg actcgggaac cgaggagtac gagctcaacg
61 gcggcctgcc tccgggcaca cccggctccc cggacgcctc gccggcccgc tggggctgga
121 ggcacgggcc catcaacgtg aaccattacg ccagcaagaa gagcgcagcc gagagcatgc
181 tggacatcgc gctgctgatg gccaacgcgt cccagctgaa ggccgtcgtg gaacagggcc
241 ccagcttcgc cttctatgtg cccctggtgg tcctcatctc catctccctt gtgctgcaga
301 tcggcgtggg ggtgctgctc atcttccttg tcaagtacga ccttaacaac ccggccaagc
361 acgccaagct ggacttcctc aacaacctgg ccacgggcct ggtgttcatc atcgtggtag
421 tcaacatctt catcacggcc ttcggggtcc agaagccctt gatggacatg gcaccccagc
481 agtaggacac ccaggaccct ggatgctgcc tgccctgcaa ctcagctgcc cgaccccagg
541 agtcgccata cctgtgaggt gtccacctcc ctgcacatgg cactacccag actgccagag
601 cccaggctgg cctcatctgc accatgtccc cggaccagcc cttgctctga ctgcggccaa
661 gcaccacgca ggaggccact cttgtctctc agcagctgtt cccaggaggc agctccctcc
721 tggcacatgg gggctggcca caatagccca gagggtcaga actggacagc tgcagagacc
781 tgtgcccaga gaagggtctc gacccactca aggacacaca gcaggtccgt ggatgggctg
841 gatgagtgac cagggccagc ctctgtctca ggacattcca gaaggacaag gagatgtctc
901 tccctctccc aaagcaccag cgtccctgcc tcccgtgggc cctgtccggg ttgccctggt
961 gaccccagcc tctgtccact tcctaaccca gggaccctgc acagccagaa ctgcctttgg
1021 ccctacggat ggccactggc tctggtctta agtgcctggg cttggtggcc atcaagaggg
1081 agccagtcag gcctgtgagg gccgtagacc ttgtatatac cctgcaccag cagtgaccgg
1141 ggagagccca accccctcca cgggggtccc agcacccact tttctaatca tgaatgaaca
1201 ataaagccca cgctctttgt cgggcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aac
//