LOCUS BC019335 1867 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens leucine rich repeat (in FLII) interacting protein 1,
mRNA (cDNA clone IMAGE:3607338), partial cds.
ACCESSION BC019335
VERSION BC019335.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52856400.
FEATURES Location/Qualifiers
source 1..1867
/db_xref="H-InvDB:HIT000089908"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3607338"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1867
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="TRIP"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
CDS 312..>1867
/gene="LRRFIP1"
/gene_synonym="FLAP-1"
/gene_synonym="FLIIAP1"
/gene_synonym="GCF-2"
/gene_synonym="GCF2"
/gene_synonym="HUFI-1"
/gene_synonym="TRIP"
/codon_start=1
/product="LRRFIP1 protein"
/protein_id="AAH19335.1"
/db_xref="GeneID:9208"
/db_xref="HGNC:HGNC:6702"
/db_xref="MIM:603256"
/translation="MTSPAAAQSREIDCLSPEAQKLAEARLAAKRAARAEAREIRMKE
LERQQKEVEERPEKDFTEKGSRNMPGLSAATLASLGGTSSRRGSGDTSISIDTEASIR
EIKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLPELEEQLAESRRQYEEK
NKEFEREKHAHSILQFQFAEVKEALKQREEMLEKHGIILNSEIATNGETSDTLNNVGY
QGPTKMTKEELNALKSTGDGTLGRASEVEVKNEIVANVGKREILHNTEKEQHTEDTVK
DCVDIEVFPAGENTEDQKSSEDTAPFLGTLAGATYEEQVQSQILESSSLPENTVQVES
NEVMGAPDDRTRTPLEPSNCWSDLDGGNHTENVGEAAVTQVEEQAGTVASCPLGHSDD
TVYHDDKCMVEVPQELETSTGHSLEKEFTNQEAAEPKEVPAHSTEVGRDHNEEEGEET
GLRDEKPIKTEVPGSPAGTEGNCQEATGPSTVDTQNEPLDMKEPDEEKSDQQGEALDS
SQKKTKKKKK"
BASE COUNT 554 a 465 c 556 g 292 t
ORIGIN
1 gcgtgggggg cggggcgggc cgtgggacgg gcggaggcgc ccgagtcccg cttccccggc
61 gcccttccac cccgagcccg actcagcccg cggccacctg cgccccgccc ctgtcggccg
121 cgcccgagcc cagcgccgcg agccgctccc cggcgggctg gctcctggcc ccggaagcgc
181 gagcgttcac ttagcggcga gtggctccgt ctccgcggac agagcgcgcg ccccctggcc
241 cggcccgcga ggggctcccg gcgcggtccc cgagcatttc ccgccgggtg gagcgggccg
301 agcccggcag gatgaccagc cccgcggccg ctcaaagccg ggagatcgac tgtttgagcc
361 cggaagcgca gaagctggcg gaagcccggc tcgctgcaaa acgggcggcc cgcgcggagg
421 ctcgcgagat ccgcatgaag gagctggagc ggcagcagaa ggaggtagaa gagagaccag
481 aaaaagattt tactgagaag gggtctcgta acatgccggg cctgtctgca gccacgctgg
541 cctctctggg tgggacttcc tctcggagag gcagcggaga cacctccatc tccatcgaca
601 ccgaggcatc catcagggaa atcaaggact ctctagcaga agttgaagag aaatataaga
661 aggctatggt ttccaatgct cagctagaca atgaaaagac aaacttcatg taccaggttg
721 ataccctaaa agatatgttg ccggagcttg aagaacagct ggctgaatct aggcggcagt
781 acgaagagaa aaacaaagaa tttgaaaggg aaaaacacgc ccacagtata ctgcaatttc
841 agtttgctga agtcaaggag gccctgaagc aaagagagga aatgctcgag aaacatggaa
901 taatcctaaa ttcagaaata gctaccaatg gagagacttc cgacaccctc aataatgttg
961 gataccaagg tcctaccaag atgacaaaag aagagttaaa tgccctcaag tcgacagggg
1021 atgggaccct aggaagagcc agtgaagtgg aggtgaaaaa tgaaatcgtg gcgaatgtgg
1081 ggaaaagaga aatcttgcac aatactgaga aagaacaaca cacagaggac acagtgaagg
1141 actgtgtgga catagaggta ttccctgctg gtgagaatac cgaggaccag aaatcctctg
1201 aagacactgc cccattccta ggaaccttag caggtgctac ctatgaggaa caggttcaaa
1261 gccaaattct tgagagcagt tctctccctg aaaacacagt acaggttgag tcaaatgagg
1321 tcatgggtgc accagatgac aggaccagaa ctccccttga gccatccaac tgttggagtg
1381 acttagatgg tgggaaccac acagagaatg tgggagaggc agcagtgact caggttgaag
1441 agcaggcagg cacagtggcc tcgtgtcctt tagggcatag tgatgacaca gtttatcatg
1501 atgacaaatg tatggtagag gtcccccaag agttagagac aagcacaggg catagtttag
1561 agaaagaatt caccaaccag gaagcagctg agcccaagga ggttccagcg cacagtacag
1621 aagtaggtag ggatcacaac gaagaagagg gtgaagaaac aggattaagg gacgagaaac
1681 caatcaagac agaagttcct ggttctccag caggaactga gggcaactgt caggaagcga
1741 caggtccaag tacagtagac actcaaaatg aacccttaga tatgaaagag cccgatgaag
1801 aaaagagtga ccaacaggga gaggcattgg actcatcgca gaagaagaca aaaaaaaaaa
1861 aaaaaaa
//