LOCUS       BC019321                 918 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens vacuolar protein sorting 28 homolog (S. cerevisiae),
            mRNA (cDNA clone MGC:4362 IMAGE:2822758), complete cds.
ACCESSION   BC019321
VERSION     BC019321.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 918)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 9 Row: d Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 34452692.
FEATURES             Location/Qualifiers
     source          1..918
                     /db_xref="H-InvDB:HIT000038638"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:4362 IMAGE:2822758"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..918
                     /gene="VPS28"
                     /gene_synonym="MGC60323"
                     /db_xref="GeneID:51160"
                     /db_xref="HGNC:HGNC:18178"
     CDS             46..711
                     /gene="VPS28"
                     /gene_synonym="MGC60323"
                     /codon_start=1
                     /product="vacuolar protein sorting 28 homolog (S.
                     cerevisiae)"
                     /protein_id="AAH19321.1"
                     /db_xref="GeneID:51160"
                     /db_xref="HGNC:HGNC:18178"
                     /translation="MFHGIPATPGIGAPGNKPELYEEVKLYKNAREREKYDNMAELFA
                     VVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLD
                     CPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLREL
                     METMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRF
                     LHA"
BASE COUNT          209 a          284 c          262 g          163 t
ORIGIN      
        1 cctcgtgccg ggtctcagtg ctgtgccccc cccagagcct agaggatgtt tcatgggatc
       61 ccagccacgc cgggcatagg agcccctggg aacaagccgg agctgtatga ggaagtgaag
      121 ttgtacaaga acgcccggga gagggagaag tacgacaaca tggcagagct gtttgcggtg
      181 gtgaagacaa tgcaagccct ggagaaggcc tacatcaagg actgtgtctc ccccagcgag
      241 tacactgcag cctgctcccg gctcctggtc caatacaaag ctgccttcag gcaggtccag
      301 ggctcagaaa tcagctctat tgacgaattc tgccgcaagt tccgcctgga ctgcccgctg
      361 gccatggagc ggatcaagga ggaccggccc atcaccatca aggacgacaa gggcaacctc
      421 aaccgctgca tcgcagacgt ggtctcgctc ttcatcacgg tcatggacaa gctgcgcctg
      481 gagatccgcg ccatggatga gatccagccc gacctgcgag agctgatgga gaccatgcac
      541 cgcatgagcc acctcccacc cgactttgag ggccgccaga cggtcagcca gtggctgcag
      601 accctgagcg gcatgtcggc gtcagatgag ctggacgact cacaggtgcg tcagatgctg
      661 ttcgacctgg agtcagccta caacgccttc aaccgcttcc tgcatgcctg agcccggggc
      721 actagccctt gcacagaagg gcagagtctg aggcgatggc tcctggtccc ctgtccgcca
      781 cacaggccgt ggtcatccac acaactcact gtctgcagct gcctgtctgg tgtctgtctt
      841 tggtgtcaga actttggggg ccgggcccct ccccacaata aagatgctct ccgaccttca
      901 aaaaaaaaaa aaaaaaaa
//