LOCUS BC019298 1534 bp mRNA linear HUM 16-FEB-2007 DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:4112 IMAGE:2905506), complete cds. ACCESSION BC019298 VERSION BC019298.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1534) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1534) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC019298.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: m Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31880337. FEATURES Location/Qualifiers source 1..1534 /db_xref="H-InvDB:HIT000038618" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4112 IMAGE:2905506" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1534 /gene="TUBA1C" /gene_synonym="bcm948" /db_xref="GeneID:84790" /db_xref="HGNC:HGNC:20768" CDS 63..1412 /gene="TUBA1C" /gene_synonym="bcm948" /codon_start=1 /product="tubulin, alpha 1c" /protein_id="AAH19298.1" /db_xref="GeneID:84790" /db_xref="HGNC:HGNC:20768" /translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY" BASE COUNT 354 a 414 c 382 g 384 t ORIGIN 1 ggagatcctt gttgccgtcc cttcgcctcc ttcaccgccg cagacccctt caagttctag 61 tcatgcgtga gtgcatctcc atccacgttg gccaggctgg tgtccagatt ggcaatgcct 121 gctgggagct ctactgcctg gaacacggca tccagcccga tggccagatg ccaagtgaca 181 agaccattgg gggaggagat gattccttca acaccttctt cagtgaaacg ggtgctggca 241 agcatgtgcc ccgggcagtg tttgtagact tggaacccac agtcattgat gaagttcgca 301 ctggcactta ccgccagctc ttccaccctg agcaactcat cacaggcaag gaagatgctg 361 ccaataacta tgcccgaggg cactacacca ttggcaagga gatcattgac ctcgtgttgg 421 accgaattcg caagctggct gaccagtgca ccggtcttca gggcttcttg gttttccaca 481 gctttggtgg gggaactggt tctgggttca cctcgctgct catggaacgt ctctcagttg 541 attatggcaa gaagtccaag ctggagttct ccatttaccc ggcgccccag gtttccacag 601 ctgtagttga gccctacaac tccatcctca ccacccacac caccctggag cactctgatt 661 gtgccttcat ggtagacaat gaggccatct atgacatctg tcgtagaaac ctcgatatcg 721 agcgcccaac ctacactaac cttaaccgcc ttattagcca gattgtgtcc tccatcactg 781 cttccctgag atttgatgga gccctgaatg ttgacctgac agaattccag accaacctgg 841 tgccctaccc ccgcatccac ttccctctgg ccacatatgc ccctgtcatc tctgctgaga 901 aagcctacca cgaacagctt actgtagcag agatcaccaa tgcttgcttt gagccagcca 961 accagatggt gaaatgtgac cctcgccatg gtaaatacat ggcttgctgc ctgttatacc 1021 gtggtgacgt ggttcccaaa gatgtcaatg ctgccattgc caccatcaaa accaagcgta 1081 ccatccagtt tgtggattgg tgccccactg gcttcaaggt tggcattaat taccagcctc 1141 ccactgtggt gcctggcgga gacctggcca aggtacagag agctgtgtgc atgctgagca 1201 ataccacagc tgttgccgag gcctgggctc gcctggacca caagtttgac ctgatgtatg 1261 ccaagcgtgc ctttgttcac tggtacgtgg gtgaggggat ggaggaaggc gagttttcag 1321 aggcccgtga ggacatggct gcccttgaga aggattatga ggaggttgga gcagatagtg 1381 ctgacggaga ggatgagggt gaagagtatt aacctgtgtg ctgtactttt acactccttt 1441 gtcttggaac tgtcttattt ttgttctgta aatgtctatt gccgtaaatt gttaataaaa 1501 ttgatgtttc cattttaaaa aaaaaaaaaa aaaa //