LOCUS BC019293 1758 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens elongation factor RNA polymerase II-like 3, mRNA (cDNA
clone MGC:4106 IMAGE:2821972), complete cds.
ACCESSION BC019293
VERSION BC019293.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1758)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1758)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376767.
FEATURES Location/Qualifiers
source 1..1758
/db_xref="H-InvDB:HIT000038613"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4106 IMAGE:2821972"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1758
/gene="ELL3"
/gene_synonym="FLJ22637"
/db_xref="GeneID:80237"
/db_xref="HGNC:HGNC:23113"
/db_xref="MIM:609885"
CDS 55..1248
/gene="ELL3"
/gene_synonym="FLJ22637"
/codon_start=1
/product="elongation factor RNA polymerase II-like 3"
/protein_id="AAH19293.1"
/db_xref="GeneID:80237"
/db_xref="HGNC:HGNC:23113"
/db_xref="MIM:609885"
/translation="MEELQEPLRGQLRLCFTQAARTSLLLLRLNDAALRALQECQRQQ
VRPVIAFQGHRGYLRLPGPGWSCLFSFIVSQCCQEGAGGSLDLVCQRFLRSGPNSLHC
LGSLRERLIIWAAMDSIPAPSSVQGHNLTEDARHPESWQNTGGYSEGDAVSQPQMALE
EVSVSDPLASNQGQSLPGSSREHMAQWEVRSQTHVPNREPVQALPSSASRKRLDKKRS
VPVATVELEEKRFRTLPLVPSPLQGLTNQDLQEGEDWEQEDEDMDPRLEHSSSVQEDS
ESPSPEDIPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAE
IKRVRRGTPEYKVLEDKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEE
KNRGS"
BASE COUNT 511 a 416 c 443 g 388 t
ORIGIN
1 cggtggtggc cctcgcctgt ggcccccgtg ctgcttgcac tcgaactcgt cgccatggag
61 gagctccagg agcctctgag aggacagctc cggctctgct tcacgcaagc tgcccggact
121 agcctcttac tgctcaggct caacgacgct gccctgcggg cgctgcaaga gtgtcagcgg
181 caacaggtac ggccggtgat tgctttccaa ggccaccgag ggtatctgag actcccaggc
241 cctggttggt cctgcctctt ctccttcata gtgtcccagt gttgtcagga gggcgctggt
301 ggtagcttgg accttgtgtg ccaacgcttc ctcaggtctg ggcctaacag cctccactgc
361 ctgggctcac tcagggagcg cctcattatt tgggcagcca tggattctat cccagcccca
421 tcatcagttc agggacacaa cctgactgaa gatgccagac atcctgagag ttggcagaac
481 acaggaggct attctgaagg agatgcagta tcacagccac agatggcact agaggaggtg
541 tcagtgtcag atccactggc aagcaaccaa ggacagtcac tcccaggatc ctcaagggag
601 cacatggcac agtgggaagt gagaagccag acccatgttc caaacagaga acctgttcag
661 gcactgcctt cctctgccag ccggaaacgt ctggacaaga aacgttcagt gcctgtagcc
721 actgtagaac tggaagaaaa gaggttcaga actctgcctt tagtgccaag ccccctacaa
781 ggcctgacca atcaggattt acaagaggga gaagattggg agcaagaaga tgaggacatg
841 gaccccagat tagaacacag ttcctcagtt caagaagatt ctgaatcccc aagtcctgaa
901 gatataccag actacctcct gcaatacagg gccatccaca gtgcagaaca gcaacatgcc
961 tatgagcagg actttgagac agattatgct gaataccgca tcctgcatgc ccgtgttggg
1021 actgcaagcc aaaggttcat agagctggga gcagagatta aaagagttcg gcgaggaact
1081 ccagaataca aggtcctgga agacaagata atccaggaat ataaaaagtt caggaagcag
1141 tacccaagtt acagagaaga aaagcgtcgc tgtgagtacc ttcaccagaa attgtcccac
1201 attaaaggtc tcatcctgga gtttgaggaa aagaacaggg gcagctgaag ttatcaaggg
1261 aatttttgag cctctgctta gtgaaacaca aaggaacaaa gcagctataa actaaataga
1321 atgcaactat ctgcttttct tatgctgacc actggagtcc atggtggcaa gtagagagct
1381 gctctaggtt cttgaggttt ggttttcatt attaattttt agggtatggg cactgtgcaa
1441 agactccata gctgtgccta ggagtctagg aaaagtgaca gaggcttggc ttttttacct
1501 ttagttcagc caagtcattt tcaagtcctg agaaatgaca tcatcttcag gataaaataa
1561 tgaggacatt agacaaacca aactaagtga attttagcct ggtagcctct ctaaggaaac
1621 agtaataata acttctgata agagttaaaa gaacttgtag catacctgga tataatggga
1681 aagggcctgg gtgttaccca tgtactgaaa atgaactttt accaacatgg ctaaaaaatt
1741 aaaaaaaaaa aaaaaaaa
//