LOCUS BC019291 1450 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1, mRNA (cDNA clone MGC:4057 IMAGE:2823545), complete cds. ACCESSION BC019291 VERSION BC019291.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1450) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1450) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: a Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18375500. FEATURES Location/Qualifiers source 1..1450 /db_xref="H-InvDB:HIT000038611" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4057 IMAGE:2823545" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1450 /gene="APEX1" /gene_synonym="APE" /gene_synonym="APE1" /gene_synonym="APEN" /gene_synonym="APX" /gene_synonym="HAP1" /gene_synonym="REF-1" /gene_synonym="REF1" /db_xref="GeneID:328" /db_xref="HGNC:HGNC:587" /db_xref="MIM:107748" CDS 218..1174 /gene="APEX1" /gene_synonym="APE" /gene_synonym="APE1" /gene_synonym="APEN" /gene_synonym="APX" /gene_synonym="HAP1" /gene_synonym="REF-1" /gene_synonym="REF1" /codon_start=1 /product="APEX nuclease (multifunctional DNA repair enzyme) 1" /protein_id="AAH19291.1" /db_xref="GeneID:328" /db_xref="HGNC:HGNC:587" /db_xref="MIM:107748" /translation="MPKRGKKGAVAEDGDELRTEPEAKKSKTAAKKNDKEAAGEGPAL YEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSEN KLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVA EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEI DLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSK NVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL" BASE COUNT 400 a 344 c 374 g 332 t ORIGIN 1 gaggagctag gctgccatcg ggccggtgca gatacggggt tgctcttttg ctcataagag 61 gggcttcgct ggcagtctga acggcaagct tgagtcagga cccttaatta agatcctcaa 121 ttggctggag ggcagatctc gcgagtaggg caacgcggta aaaatattgc ttcggtgggt 181 gacgcggtac agctgcccaa gggcgttcgt aacgggaatg ccgaagcgtg ggaaaaaggg 241 agcggtggcg gaagacgggg atgagctcag gacagagcca gaggccaaga agagtaagac 301 ggccgcaaag aaaaatgaca aagaggcagc aggagagggc ccagccctgt atgaggaccc 361 cccagatcag aaaacctcac ccagtggcaa acctgccaca ctcaagatct gctcttggaa 421 tgtggatggg cttcgagcct ggattaagaa gaaaggatta gattgggtaa aggaagaagc 481 cccagatata ctgtgccttc aagagaccaa atgttcagag aacaaactac cagctgaact 541 tcaggagctg cctggactct ctcatcaata ctggtcagct ccttcggaca aggaagggta 601 cagtggcgtg ggcctgcttt cccgccagtg cccactcaaa gtttcttacg gcataggcga 661 ggaggagcat gatcaggaag gccgggtgat tgtggctgaa tttgactcgt ttgtgctggt 721 aacagcatat gtacctaatg caggccgagg tctggtacga ctggagtacc ggcagcgctg 781 ggatgaagcc tttcgcaagt tcctgaaggg cctggcttcc cgaaagcccc ttgtgctgtg 841 tggagacctc aatgtggcac atgaagaaat tgaccttcgc aaccccaagg ggaacaaaaa 901 gaatgctggc ttcacgccac aagagcgcca aggcttcggg gaattactgc aggctgtgcc 961 actggctgac agctttaggc acctctaccc caacacaccc tatgcctaca ccttttggac 1021 ttatatgatg aatgctcgat ccaagaatgt tggttggcgc cttgattact ttttgttgtc 1081 ccactctctg ttacctgcat tgtgtgacag caagatccgt tccaaggccc tcggcagtga 1141 tcactgtcct atcaccctat acctagcact gtgacaccac ccctaaatca ctttgagcct 1201 gggaaataag ccccctcaac taccattcct tctttaaaca ctcttcagag aaatctgcat 1261 tctatttctc atgtataaaa ctaggaatcc tccaaccagg ctcctgtgat agagttcttt 1321 taagcccaag attttttatt tgagggtttt ttgtttttta aaaaaaaatt gaacaaagac 1381 tactaatgac tttgtttgaa ttatccacat gaaaataaag agccatagtt tcaaaaaaaa 1441 aaaaaaaaaa //