LOCUS BC019289 1455 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromobox homolog 8 (Pc class homolog, Drosophila),
mRNA (cDNA clone MGC:4043 IMAGE:2821280), complete cds.
ACCESSION BC019289
VERSION BC019289.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1455)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1455)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: h Column: 3.
FEATURES Location/Qualifiers
source 1..1455
/db_xref="H-InvDB:HIT000038610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4043 IMAGE:2821280"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1455
/gene="CBX8"
/gene_synonym="HPC3"
/gene_synonym="PC3"
/gene_synonym="RC1"
/db_xref="GeneID:57332"
/db_xref="HGNC:HGNC:15962"
CDS 16..1185
/gene="CBX8"
/gene_synonym="HPC3"
/gene_synonym="PC3"
/gene_synonym="RC1"
/codon_start=1
/product="chromobox homolog 8 (Pc class homolog,
Drosophila)"
/protein_id="AAH19289.1"
/db_xref="GeneID:57332"
/db_xref="HGNC:HGNC:15962"
/translation="MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEP
EENILDARLLAAFEEREREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRSDSARGI
RIPYPGRSPQDLASTSRAREGLRNMGLSPPASSTSTSSTCRAEAPRDRDRDRDRDRER
DRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRKELPDPSQRPLGEP
SAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAEATGKLA
VDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSVGGLYRDMGAQGGRPSLI
ARIPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFKEKR"
BASE COUNT 363 a 400 c 454 g 238 t
ORIGIN
1 aagcggcgag tcaacatgga gctttcagcg gtgggggagc gggtgttcgc ggccgaagcc
61 ctcctgaagc ggcgcatacg gaaaggacgc atggaatacc tcgtgaaatg gaagggatgg
121 tcgcagaagt acagcacatg ggaaccggag gaaaacatcc tggatgctcg cttgctcgca
181 gcctttgagg aaagggaaag agagatggag ctctatggcc ccaaaaagcg tggacccaag
241 cccaaaacct tcctcctcaa agcgcaggcc aaggcaaagg ccaaaactta cgagtttcga
301 agtgactcag ccaggggcat ccggatcccc taccctggcc gctcgcccca ggacctggcc
361 tccacttccc gggcccggga gggccttcga aacatgggtt tgtccccgcc agcgagcagc
421 accagcacca gcagcacctg ccgcgcagag gcccctcggg accgggaccg agaccgggat
481 agggaccggg agcgggatcg agaaagggag agggagcgag agagggagcg ggaacgtgag
541 agggaacgag agcggggtac cagcagagtg gatgacaagc ccagctcacc gggggacagc
601 tcgaagaagc gaggccccaa gccccggaag gagctcccgg acccctcaca gaggccctta
661 ggcgaaccca gcgccggcct cggagagtac ctcaagggca ggaagctgga cgacacccct
721 tccggggcag gaaagtttcc agccggccac agtgtgatcc agctggcccg aagacaggac
781 tcggacctgg tgcagtgtgg tgtgaccagc cctagctcag ctgaggccac gggcaaactg
841 gctgtggaca ccttcccggc cagggtgata aagcacaggg ctgccttcct ggaggccaaa
901 ggccagggtg ccctagatcc caatggcacc cgggtccgac atggctcagg cccccccagc
961 tctgtggggg gcctgtaccg ggacatgggg gcccaggggg gaaggccctc cctcatcgcc
1021 aggatccctg tggccagaat cctgggggac ccggaggaag agtcctggag cccctccctg
1081 actaacctgg agaaggtggt ggtcacggac gtgacctcaa actttttgac cgtcaccatt
1141 aaggaaagta acacggacca aggctttttt aaagagaaaa gatgaatgct gggtgggtgt
1201 gtccaggagg agagcagggg agagagtgag cgtgagcttg gcatagtgat ttttatttct
1261 gggtgggatg tggccttttg gctggtcccg tccctgatgt cacccccacc ccaccagccc
1321 ctttcatccc tccttcctcc ccctcagttt ttgttggaaa gattatctct agagttatat
1381 tttctattag atgtaaatat gttatttaag aaaaatatct aaatataaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaac
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