LOCUS BC019283 2002 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TRAF interacting protein, mRNA (cDNA clone MGC:3999
IMAGE:2821007), complete cds.
ACCESSION BC019283
VERSION BC019283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2002)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2002)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807468.
FEATURES Location/Qualifiers
source 1..2002
/db_xref="H-InvDB:HIT000038606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3999 IMAGE:2821007"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2002
/gene="TRAIP"
/gene_synonym="RNF206"
/gene_synonym="TRIP"
/db_xref="GeneID:10293"
/db_xref="HGNC:HGNC:30764"
/db_xref="MIM:605958"
CDS 88..1497
/gene="TRAIP"
/gene_synonym="RNF206"
/gene_synonym="TRIP"
/codon_start=1
/product="TRAF interacting protein"
/protein_id="AAH19283.1"
/db_xref="GeneID:10293"
/db_xref="HGNC:HGNC:30764"
/db_xref="MIM:605958"
/translation="MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSR
TCPQCRIQVGKRTIINKLFFDLAQEEENVLDAEFLKNELDNVRAQLSQKDKEKRDSQV
IIDTLRDTLEERNATVVSLQQALGKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLR
SKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKAS
GEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEIMSLKKKLTMLQE
TLNLPPVASETVDRLVLESPAPVEVNLKLRRPSFRDDIDLNATFDVDTPPARPSSSQH
GYYEKLCLEKSHSPIQDVPKKICKGPRKESQLSLGGQSCAGEPDEELVGAFPIFVRNA
ILGQKQPKRPRSESSCSKDVVRTGFDGLGGRTKFIQPTDTVMIRPLPVKPKTKVKQRV
RVKTVPSLFQAKLDTFLWS"
BASE COUNT 516 a 517 c 556 g 413 t
ORIGIN
1 gaagcaagcg gaggcgcggg ggcgcgtcta cgaagccgga cctgtagcag tttctttggc
61 tgcctgggcc ccttgagtcc agccatcatg cctatccgtg ctctgtgcac tatctgctcc
121 gacttcttcg atcactcccg cgacgtggcc gccatccact gcggccacac cttccacttg
181 cagtgcctaa ttcagtggtt tgagacagca ccaagtcgga cctgcccaca gtgccgaatc
241 caggttggca aaagaaccat tatcaataag ctcttctttg atcttgccca ggaggaggag
301 aatgtcttgg atgcagaatt cttaaagaat gaactggaca atgtcagagc ccagctttcc
361 cagaaagaca aggagaaacg agacagccag gtcatcatcg acactctgcg ggatacgctg
421 gaagaacgca atgctactgt ggtatctctg cagcaggcct tgggcaaggc cgagatgctg
481 tgctccacac tgaaaaagca gatgaagtac ttagagcagc agcaggatga gaccaaacaa
541 gcacaagagg aggcccgccg gctcaggagc aagatgaaga ccatggagca gattgagctt
601 ctactccaga gccagcgccc tgaggtggag gagatgatcc gagacatggg tgtgggacag
661 tcagcggtgg aacagctggc tgtgtactgt gtgtctctca agaaagagta cgagaatcta
721 aaagaggcac ggaaggcctc aggggaggtg gctgacaagc tgaggaagga tttgttttcc
781 tccagaagca agttgcagac agtctactct gaattggatc aggccaagtt agaactgaag
841 tcagcccaga aggacttaca gagtgctgac aaggaaatca tgagcctgaa aaagaagcta
901 acgatgctgc aggaaacctt gaacctgcca ccagtggcca gtgagactgt cgaccgcctg
961 gttttagaga gcccagcccc tgtggaggtg aatctgaagc tccgccggcc atccttccgt
1021 gatgatattg atctcaatgc tacctttgat gtggatactc ccccagcccg gccctccagc
1081 tcccagcatg gttactacga aaaactttgc ctagagaagt cacactcccc aattcaggat
1141 gtccccaaga agatatgcaa aggccccagg aaggagtccc agctctcact gggtggccag
1201 agctgtgcag gagagccaga tgaggaactg gttggtgcct tccctatttt tgtccggaat
1261 gccatcctag gccagaaaca gcccaagagg cccaggtcag agtcctcttg cagcaaagat
1321 gtggtaagga caggcttcga tgggctcggt ggccggacaa aattcatcca gcctactgac
1381 acagtcatga tccgcccatt gcctgttaag cccaagacca aggttaagca gagggtgagg
1441 gtgaagacag tgccttctct cttccaggcc aagctggaca ccttcctgtg gtcgtgagaa
1501 cagtgagtct gaccaatggc cagacacatg cctgcaactt gtaggtcaag gactgtccag
1561 gcaggggttt tgtggacaga gccccacttt cgggaccagc ctgaggtgta agggcagaca
1621 aacaggtgag gatgagtgtg gcacccagag actgctcttc ctgccctcac cctgccccac
1681 tcctacgact gggagctgac atgaccagcc cactgatcct gtcagcaggt cctgctcctg
1741 ttgccaggct cctgtttata gccatgatca gatgtggtca gactctttct gggcctggag
1801 accacggtca cttgttgact gtctctgtgg accagagtgc ttgaggcatc tcaggcagcc
1861 tcagcccaag cttctacctg cctttgactt gcttctaggc atagcctggg ccaagcaggg
1921 tgggtaatgg aggatagcat gggatgtatg gagaggatgg aagattttca tgtaaaataa
1981 aattaaaaaa aaaaaaaaaa aa
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