LOCUS BC019273 1406 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone
MGC:3552 IMAGE:2823760), complete cds.
ACCESSION BC019273
VERSION BC019273.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1406)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1406)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66346684.
FEATURES Location/Qualifiers
source 1..1406
/db_xref="H-InvDB:HIT000038596"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3552 IMAGE:2823760"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1406
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
CDS 78..1304
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/codon_start=1
/product="SERPINE1 mRNA binding protein 1"
/protein_id="AAH19273.1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
/translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG
GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK
KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR
PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGG
SGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENE
VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAH
AEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSS
ASAPDVDDPEAFPALA"
BASE COUNT 430 a 298 c 417 g 261 t
ORIGIN
1 gaagagctga agcaggcgct cttggctcgg cgcggcccgc tgcaatccgt ggaggaacgc
61 gccgccgagc caccatcatg cctgggcact tacaggaagg cttcggctgc gtggtcacca
121 accgattcga ccagttattt gacgacgaat cggacccctt cgaggtgctg aaggcagcag
181 agaacaagaa aaaagaagcc ggcgggggcg gcgttggggg ccctggggcc aagagcgcag
241 ctcaggccgc ggcccagacc aactccaacg cggcaggcaa acagctgcgc aaggagtccc
301 agaaagaccg caagaacccg ctgcccccca gcgttggcgt ggttgacaag aaagaggaga
361 cgcagccgcc cgtggcgctt aagaaagaag gaataagacg agttggaaga agacctgatc
421 aacaacttca gggtgaaggg aaaataattg atagaagacc agaaaggcga ccacctcgtg
481 aacgaagatt cgaaaagcca cttgaagaaa agggtgaagg aggcgaattt tcagttgata
541 gaccgattat tgaccgacct attcgaggtc gtggtggtct tggaagaggt cgagggggcc
601 gtggacgtgg aatgggccga ggagatggat ttgattctcg tggcaaacgt gaatttgata
661 ggcatagtgg aagtgataga tcttcttttt cacattacag tggcctgaag cacgaggaca
721 aacgtggagg tagcggatct cacaactggg gaactgtcaa agacgaatta acagagtccc
781 ccaaatacat tcagaaacaa atatcttata attacagtga cttggatcaa tcaaatgtga
841 ctgaggaaac acctgaaggt gaagaacatc atccagtggc agacactgaa aataaggaga
901 atgaagttga agaggtaaaa gaggagggtc caaaagagat gactttggat gagtggaagg
961 ctattcaaaa taaggaccgg gcaaaagtag aatttaatat ccgaaaacca aatgaaggtg
1021 ctgatgggca gtggaagaag ggatttgttc ttcataaatc aaagagtgaa gaggctcatg
1081 ctgaagattc ggttatggac catcatttcc ggaagccagc aaatgatata acgtctcagc
1141 tggagatcaa ttttggagac cttggccgcc caggacgtgg cggcagggga ggacgaggtg
1201 gacgtgggcg tggtgggcgc ccaaaccgtg gcagcaggac cgacaagtca agtgcttctg
1261 ctcctgatgt ggatgaccca gaggcattcc cagctctggc ttaactggat gccataagac
1321 aaccctggtt cctttgtgaa cccttctgtt caaagctttt gcatgcttaa ggattccaaa
1381 cgactaagaa aaaaaaaaaa aaaaaa
//