LOCUS BC019262 1349 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Huntingtin interacting protein K, mRNA (cDNA clone
MGC:2632 IMAGE:3504222), complete cds.
ACCESSION BC019262
VERSION BC019262.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1349)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1349)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: d Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361540.
FEATURES Location/Qualifiers
source 1..1349
/db_xref="H-InvDB:HIT000038587"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2632 IMAGE:3504222"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1349
/gene="HYPK"
/gene_synonym="HSPC136"
/db_xref="GeneID:25764"
CDS 177..566
/gene="HYPK"
/gene_synonym="HSPC136"
/codon_start=1
/product="Huntingtin interacting protein K"
/protein_id="AAH19262.2"
/db_xref="GeneID:25764"
/translation="MRRRGEIDMATEGDVELELETETSGPERPPEKPRKHDSGAADLE
RVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQEREKELAKVTIKKEDLELIMTEM
EISRAAAERSLREHMGNVVEALIALTN"
BASE COUNT 401 a 279 c 366 g 303 t
ORIGIN
1 agaaggcctc gcacaaaaca ctgtacaaac ccgaaaggaa gtctgagaga cgaaccgcct
61 tcctccctga agcttctaga actggagcag aaagaaggtg tggcccaggg ccagccccgc
121 ctcctccccg ggcggaagct gtgtcagttg ccggaagtcg gcgtgaggtg gggcttatgc
181 ggcggcgtgg tgaaatagat atggcgaccg agggggatgt ggagctggag ttggagactg
241 agaccagtgg accagagcgg cctccggaga agccacggaa acatgacagc ggtgcggcgg
301 acttggagcg ggtcaccgac tatgcagagg agaaggagat ccagagttcc aatctggaga
361 cggccatgtc tgtgattgga gacagaaggt cccgggagca gaaagccaaa caggagcggg
421 agaaagaact ggcaaaagtc actatcaaga aggaagatct ggagctaata atgactgaga
481 tggagatatc tcgagcagca gcagaacgca gtttgcggga acacatgggc aacgtggtag
541 aggcgcttat tgccctaacc aactgatgcg tgctttctca aatataccta ctggattaat
601 ttatggcaat aaaatttttt tttgtctttt tcagttttat catcttgggt caagtagagt
661 gtatactata tcctatgttg tggagaattt atatgttgga gactaactga atttaagtga
721 cccattaaaa tctagcacac ctgtatgaaa aatcagtgta gaagaatacc tcatgtgcag
781 atgctaggtg gcaggccagt ctcattcatc tgactagctc tcaacagtat tcaaggtaca
841 tctggagtct cagcagagtt actgtactca aatggcatgt gtctccaaga cagcttatga
901 atatctaaaa ggccagctac ctgcctagga gccactatat atatagatag atgtaggtta
961 tgaacccagt tcataggcca ccttgagtta gaattttggt acctacaaca tgcttgattt
1021 tgagtgatta aaaaaaaata atttggctgg gtgctgtggc tcacgcctct aatcccagca
1081 ctttgggagg tcgaggcagg tagatcacga ggtcaggaat tcaagaccag cctggccaac
1141 atgtgaaacc ccgtctccac tgaaaataga aaaattagct gggcatggtg gtgggcgcct
1201 ataatcccag ctattctgga ggctgaggca ggaatcgctt gaaattggaa agcagaggtt
1261 gcagtgagct gagatcacac tactgtacta ctgtactcca gcctggggga aagagtgaaa
1321 ctccatctca aaaaaaaaaa aaaaaaaaa
//